Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDH4P55283 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 KRT8P37-201ENST00000451609 1420 ntBASIC16.48■□□□□ 0.23
CDH4P55283 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH4P55283 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH4P55283 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH4P55283 BCRP1-201ENST00000444246 691 ntBASIC16.48■□□□□ 0.23
CDH4P55283 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH4P55283 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH4P55283 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH4P55283 MIR6069-201ENST00000620069 79 ntBASIC16.48■□□□□ 0.23
CDH4P55283 AJ011932.1-201ENST00000621707 465 ntBASIC16.48■□□□□ 0.23
CDH4P55283 AL033527.5-202ENST00000641632 1098 ntBASIC16.48■□□□□ 0.23
CDH4P55283 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH4P55283 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CDH4P55283 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH4P55283 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH4P55283 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH4P55283 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDH4P55283 AC134407.2-201ENST00000625089 1978 ntBASIC16.47■□□□□ 0.23
CDH4P55283 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDH4P55283 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 AC099398.1-201ENST00000567919 2776 ntBASIC16.47■□□□□ 0.23
CDH4P55283 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH4P55283 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.47■□□□□ 0.23
CDH4P55283 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH4P55283 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH4P55283 RN7SL618P-201ENST00000477850 296 ntBASIC16.47■□□□□ 0.23
CDH4P55283 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.47■□□□□ 0.23
CDH4P55283 AL844908.2-201ENST00000609461 460 ntBASIC16.47■□□□□ 0.23
CDH4P55283 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CDH4P55283 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CDH4P55283 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CDH4P55283 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH4P55283 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms