Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.86■□□□□ 0.29
MMP13P45452 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
MMP13P45452 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP13P45452 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP13P45452 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP13P45452 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MMP13P45452 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MMP13P45452 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MMP13P45452 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 AC016027.1-202ENST00000607927 1699 ntBASIC16.85■□□□□ 0.29
MMP13P45452 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 LINC01144-201ENST00000626198 1710 ntBASIC16.85■□□□□ 0.29
MMP13P45452 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
MMP13P45452 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MMP13P45452 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MMP13P45452 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.85■□□□□ 0.29
MMP13P45452 AL078644.1-201ENST00000609881 752 ntBASIC16.85■□□□□ 0.29
MMP13P45452 C20orf181-201ENST00000623918 480 ntBASIC16.85■□□□□ 0.29
MMP13P45452 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MMP13P45452 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
MMP13P45452 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP13P45452 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP13P45452 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.85■□□□□ 0.29
MMP13P45452 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP13P45452 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MMP13P45452 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP13P45452 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MMP13P45452 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MMP13P45452 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MMP13P45452 AC023157.3-201ENST00000619086 2088 ntBASIC16.84■□□□□ 0.29
MMP13P45452 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
MMP13P45452 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.84■□□□□ 0.29
MMP13P45452 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 DNAJB3-201ENST00000446806 729 ntBASIC16.84■□□□□ 0.29
MMP13P45452 KRT18P34-201ENST00000488218 1270 ntBASIC16.84■□□□□ 0.29
MMP13P45452 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.84■□□□□ 0.29
MMP13P45452 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.84■□□□□ 0.29
MMP13P45452 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
MMP13P45452 AC092902.6-201ENST00000641783 218 ntBASIC16.84■□□□□ 0.29
MMP13P45452 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 WASH6P-202ENST00000359512 1437 ntBASIC16.84■□□□□ 0.29
MMP13P45452 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP13P45452 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP13P45452 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms