Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ATP6V1AP38606 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ATP6V1AP38606 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ATP6V1AP38606 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 MPV17-206ENST00000402722 827 ntTSL 3 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 AC016694.1-201ENST00000434179 700 ntBASIC20.4■□□□□ 0.86
ATP6V1AP38606 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 VDAC1P7-201ENST00000462417 847 ntBASIC20.4■□□□□ 0.86
ATP6V1AP38606 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.4■□□□□ 0.86
ATP6V1AP38606 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 HADH-212ENST00000638621 741 ntTSL 5 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ATP6V1AP38606 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.4■□□□□ 0.86
ATP6V1AP38606 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V1AP38606 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V1AP38606 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP6V1AP38606 AC105020.1-201ENST00000435356 2205 ntBASIC20.39■□□□□ 0.86
ATP6V1AP38606 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
ATP6V1AP38606 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ATP6V1AP38606 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.39■□□□□ 0.86
ATP6V1AP38606 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.39■□□□□ 0.86
ATP6V1AP38606 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V1AP38606 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V1AP38606 UBALD1-205ENST00000590891 2641 ntBASIC20.39■□□□□ 0.85
ATP6V1AP38606 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.39■□□□□ 0.85
ATP6V1AP38606 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 YBX1P6-201ENST00000442962 1002 ntBASIC20.39■□□□□ 0.85
ATP6V1AP38606 AC012441.1-201ENST00000446669 685 ntBASIC20.39■□□□□ 0.85
ATP6V1AP38606 AC093433.1-201ENST00000458048 571 ntBASIC20.39■□□□□ 0.85
ATP6V1AP38606 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V1AP38606 AC106760.1-201ENST00000508690 800 ntBASIC20.39■□□□□ 0.85
ATP6V1AP38606 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 MIR3615-201ENST00000581999 87 ntBASIC20.39■□□□□ 0.85
ATP6V1AP38606 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V1AP38606 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V1AP38606 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V1AP38606 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 HLA-A-202ENST00000376806 1854 ntBASIC20.39■□□□□ 0.85
ATP6V1AP38606 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.39■□□□□ 0.85
ATP6V1AP38606 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ATP6V1AP38606 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 AC026954.1-201ENST00000429771 1293 ntBASIC20.38■□□□□ 0.85
ATP6V1AP38606 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 EMC4-209ENST00000559421 497 ntTSL 2 BASIC20.38■□□□□ 0.85
ATP6V1AP38606 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ATP6V1AP38606 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms