Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SFTPDP35247 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SFTPDP35247 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SFTPDP35247 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SFTPDP35247 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.68□□□□□ -0.06
SFTPDP35247 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.68□□□□□ -0.06
SFTPDP35247 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SFTPDP35247 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
SFTPDP35247 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SFTPDP35247 AL139400.1-201ENST00000366220 510 ntBASIC14.68□□□□□ -0.06
SFTPDP35247 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.68□□□□□ -0.06
SFTPDP35247 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
SFTPDP35247 GPS2P2-201ENST00000430745 888 ntBASIC14.68□□□□□ -0.06
SFTPDP35247 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.68□□□□□ -0.06
SFTPDP35247 AC109322.1-201ENST00000524499 1264 ntBASIC14.68□□□□□ -0.06
SFTPDP35247 AC026150.2-201ENST00000564693 1156 ntBASIC14.68□□□□□ -0.06
SFTPDP35247 RARRES2P9-201ENST00000565168 469 ntBASIC14.68□□□□□ -0.06
SFTPDP35247 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.68□□□□□ -0.06
SFTPDP35247 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 MIR6080-201ENST00000617359 66 ntBASIC14.68□□□□□ -0.06
SFTPDP35247 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.68□□□□□ -0.06
SFTPDP35247 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.68□□□□□ -0.06
SFTPDP35247 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SFTPDP35247 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.68□□□□□ -0.06
SFTPDP35247 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.68□□□□□ -0.06
SFTPDP35247 LINC02199-201ENST00000506655 2702 ntBASIC14.68□□□□□ -0.06
SFTPDP35247 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SFTPDP35247 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
SFTPDP35247 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.68□□□□□ -0.06
SFTPDP35247 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SFTPDP35247 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.68□□□□□ -0.06
SFTPDP35247 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SFTPDP35247 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPDP35247 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPDP35247 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPDP35247 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 FAM220BP-201ENST00000377689 816 ntBASIC14.67□□□□□ -0.06
SFTPDP35247 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPDP35247 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 AC092183.1-201ENST00000469884 875 ntBASIC14.67□□□□□ -0.06
SFTPDP35247 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPDP35247 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.67□□□□□ -0.06
SFTPDP35247 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPDP35247 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.67□□□□□ -0.06
SFTPDP35247 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.67□□□□□ -0.06
SFTPDP35247 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPDP35247 AC024267.1-201ENST00000582320 895 ntBASIC14.67□□□□□ -0.06
SFTPDP35247 AC093028.1-201ENST00000622998 982 ntBASIC14.67□□□□□ -0.06
SFTPDP35247 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPDP35247 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
SFTPDP35247 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.67□□□□□ -0.06
SFTPDP35247 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.67□□□□□ -0.06
SFTPDP35247 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms