Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
HOXC13P31276 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC13P31276 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC13P31276 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
HOXC13P31276 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.67■□□□□ 0.26
HOXC13P31276 GIMAP3P-201ENST00000495150 836 ntBASIC16.67■□□□□ 0.26
HOXC13P31276 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.67■□□□□ 0.26
HOXC13P31276 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.67■□□□□ 0.26
HOXC13P31276 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC13P31276 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
HOXC13P31276 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
HOXC13P31276 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
HOXC13P31276 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC13P31276 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC13P31276 AL603832.2-201ENST00000566195 2125 ntBASIC16.67■□□□□ 0.26
HOXC13P31276 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.67■□□□□ 0.26
HOXC13P31276 AC069224.1-201ENST00000566372 1715 ntBASIC16.67■□□□□ 0.26
HOXC13P31276 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC13P31276 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC13P31276 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC13P31276 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC13P31276 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.67■□□□□ 0.26
HOXC13P31276 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
HOXC13P31276 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
HOXC13P31276 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HOXC13P31276 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.66■□□□□ 0.26
HOXC13P31276 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXC13P31276 AC135586.1-201ENST00000539323 574 ntBASIC16.66■□□□□ 0.26
HOXC13P31276 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HOXC13P31276 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXC13P31276 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.66■□□□□ 0.26
HOXC13P31276 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXC13P31276 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HOXC13P31276 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.66■□□□□ 0.26
HOXC13P31276 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
HOXC13P31276 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
HOXC13P31276 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXC13P31276 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.65■□□□□ 0.26
HOXC13P31276 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
HOXC13P31276 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC13P31276 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC13P31276 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
HOXC13P31276 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC13P31276 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 MIR1909-201ENST00000411312 80 ntBASIC16.65■□□□□ 0.26
HOXC13P31276 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC13P31276 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
HOXC13P31276 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXC13P31276 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.65■□□□□ 0.26
HOXC13P31276 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 AC105021.1-202ENST00000570572 669 ntBASIC16.65■□□□□ 0.26
HOXC13P31276 AC140912.1-201ENST00000577171 1054 ntBASIC16.65■□□□□ 0.26
HOXC13P31276 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.65■□□□□ 0.26
HOXC13P31276 AC008494.3-201ENST00000606615 944 ntBASIC16.65■□□□□ 0.26
HOXC13P31276 MIR6799-201ENST00000620297 69 ntBASIC16.65■□□□□ 0.26
HOXC13P31276 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HOXC13P31276 AP001282.1-201ENST00000531301 1499 ntBASIC16.65■□□□□ 0.26
HOXC13P31276 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HOXC13P31276 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms