Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 AP006294.1-201ENST00000415407 339 ntBASIC16.05■□□□□ 0.16
PCDHGA12O60330 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 RN7SL618P-201ENST00000477850 296 ntBASIC16.05■□□□□ 0.16
PCDHGA12O60330 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 AC093004.1-201ENST00000508850 424 ntBASIC16.05■□□□□ 0.16
PCDHGA12O60330 IGHV3-71-201ENST00000523324 359 ntBASIC16.05■□□□□ 0.16
PCDHGA12O60330 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 RNF216P1-203ENST00000404404 2427 ntBASIC16.05■□□□□ 0.16
PCDHGA12O60330 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGA12O60330 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGA12O60330 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 AC104794.3-201ENST00000566840 1248 ntBASIC16.04■□□□□ 0.16
PCDHGA12O60330 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 AC092171.3-201ENST00000610122 2651 ntBASIC16.04■□□□□ 0.16
PCDHGA12O60330 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 AC006277.1-201ENST00000624348 1610 ntBASIC16.04■□□□□ 0.16
PCDHGA12O60330 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 AC026691.1-201ENST00000602502 2017 ntBASIC16.04■□□□□ 0.16
PCDHGA12O60330 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 PCDHB17P-201ENST00000539533 2393 ntBASIC16.04■□□□□ 0.16
PCDHGA12O60330 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGA12O60330 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGA12O60330 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGA12O60330 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PCDHGA12O60330 DGCR5-201ENST00000399539 862 ntBASIC16.03■□□□□ 0.16
PCDHGA12O60330 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms