Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.36■□□□□ 0.05
UPK1AO00322 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.36■□□□□ 0.05
UPK1AO00322 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.36■□□□□ 0.05
UPK1AO00322 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
UPK1AO00322 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 WASH6P-202ENST00000359512 1437 ntBASIC15.35■□□□□ 0.05
UPK1AO00322 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.35■□□□□ 0.05
UPK1AO00322 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
UPK1AO00322 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 AL592424.1-201ENST00000563624 1536 ntBASIC15.35■□□□□ 0.05
UPK1AO00322 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 MIR648-201ENST00000385046 94 ntBASIC15.35■□□□□ 0.05
UPK1AO00322 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UPK1AO00322 POLD2P1-201ENST00000511220 997 ntBASIC15.35■□□□□ 0.05
UPK1AO00322 PGAM5P1-201ENST00000518923 814 ntBASIC15.35■□□□□ 0.05
UPK1AO00322 AC112191.1-201ENST00000523689 701 ntBASIC15.35■□□□□ 0.05
UPK1AO00322 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
UPK1AO00322 AC040169.1-201ENST00000565382 521 ntBASIC15.35■□□□□ 0.05
UPK1AO00322 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UPK1AO00322 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
UPK1AO00322 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 AC099522.2-201ENST00000607001 744 ntBASIC15.35■□□□□ 0.05
UPK1AO00322 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
UPK1AO00322 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.35■□□□□ 0.05
UPK1AO00322 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.35■□□□□ 0.05
UPK1AO00322 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
UPK1AO00322 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
UPK1AO00322 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
UPK1AO00322 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1AO00322 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
UPK1AO00322 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.34■□□□□ 0.05
UPK1AO00322 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.34■□□□□ 0.05
UPK1AO00322 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 AC020658.6-201ENST00000623564 1870 ntBASIC15.34■□□□□ 0.05
UPK1AO00322 U82695.1-201ENST00000635752 1889 ntBASIC15.34■□□□□ 0.05
UPK1AO00322 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
UPK1AO00322 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 AC093724.1-201ENST00000448659 1027 ntBASIC15.34■□□□□ 0.05
UPK1AO00322 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.34■□□□□ 0.05
UPK1AO00322 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
UPK1AO00322 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.34■□□□□ 0.05
UPK1AO00322 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UPK1AO00322 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
UPK1AO00322 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UPK1AO00322 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
UPK1AO00322 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
UPK1AO00322 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
UPK1AO00322 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.33■□□□□ 0.05
UPK1AO00322 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UPK1AO00322 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.33■□□□□ 0.05
UPK1AO00322 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.33■□□□□ 0.05
UPK1AO00322 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UPK1AO00322 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms