Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.38■□□□□ 0.21
AP3B1O00203 RN7SL589P-201ENST00000481268 310 ntBASIC16.38■□□□□ 0.21
AP3B1O00203 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.38■□□□□ 0.21
AP3B1O00203 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.38■□□□□ 0.21
AP3B1O00203 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.38■□□□□ 0.21
AP3B1O00203 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.38■□□□□ 0.21
AP3B1O00203 SPTSSB-204ENST00000617024 1292 ntBASIC16.38■□□□□ 0.21
AP3B1O00203 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.38■□□□□ 0.21
AP3B1O00203 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
AP3B1O00203 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.38■□□□□ 0.21
AP3B1O00203 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
AP3B1O00203 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.38■□□□□ 0.21
AP3B1O00203 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.38■□□□□ 0.21
AP3B1O00203 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.38■□□□□ 0.21
AP3B1O00203 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.38■□□□□ 0.21
AP3B1O00203 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
AP3B1O00203 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
AP3B1O00203 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
AP3B1O00203 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.37■□□□□ 0.21
AP3B1O00203 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
AP3B1O00203 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.37■□□□□ 0.21
AP3B1O00203 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.37■□□□□ 0.21
AP3B1O00203 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.37■□□□□ 0.21
AP3B1O00203 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.37■□□□□ 0.21
AP3B1O00203 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.37■□□□□ 0.21
AP3B1O00203 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.37■□□□□ 0.21
AP3B1O00203 AC140113.2-201ENST00000604370 208 ntBASIC16.37■□□□□ 0.21
AP3B1O00203 AC099522.2-201ENST00000607001 744 ntBASIC16.37■□□□□ 0.21
AP3B1O00203 AL513190.1-201ENST00000621254 727 ntBASIC16.37■□□□□ 0.21
AP3B1O00203 AC008267.7-201ENST00000624570 1194 ntBASIC16.37■□□□□ 0.21
AP3B1O00203 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
AP3B1O00203 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
AP3B1O00203 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
AP3B1O00203 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.37■□□□□ 0.21
AP3B1O00203 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
AP3B1O00203 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.37■□□□□ 0.21
AP3B1O00203 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
AP3B1O00203 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
AP3B1O00203 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
AP3B1O00203 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.36■□□□□ 0.21
AP3B1O00203 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.36■□□□□ 0.21
AP3B1O00203 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.36■□□□□ 0.21
AP3B1O00203 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
AP3B1O00203 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
AP3B1O00203 GPX1P2-201ENST00000429271 606 ntBASIC16.36■□□□□ 0.21
AP3B1O00203 AL671277.1-201ENST00000429656 993 ntBASIC16.36■□□□□ 0.21
AP3B1O00203 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.36■□□□□ 0.21
AP3B1O00203 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms