Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS11Q9H270 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
VPS11Q9H270 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 RNPS1P1-201ENST00000507437 918 ntBASIC16.35■□□□□ 0.21
VPS11Q9H270 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.35■□□□□ 0.21
VPS11Q9H270 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.35■□□□□ 0.21
VPS11Q9H270 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
VPS11Q9H270 CLEC4GP1-201ENST00000596555 870 ntBASIC16.35■□□□□ 0.21
VPS11Q9H270 IFNL4P1-201ENST00000607083 540 ntBASIC16.35■□□□□ 0.21
VPS11Q9H270 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
VPS11Q9H270 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 TMBIM7P-203ENST00000641617 1718 ntBASIC16.35■□□□□ 0.21
VPS11Q9H270 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS11Q9H270 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS11Q9H270 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.35■□□□□ 0.21
VPS11Q9H270 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.35■□□□□ 0.21
VPS11Q9H270 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
VPS11Q9H270 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
VPS11Q9H270 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
VPS11Q9H270 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS11Q9H270 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS11Q9H270 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS11Q9H270 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS11Q9H270 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 MRPL20P1-201ENST00000400819 433 ntBASIC16.34■□□□□ 0.21
VPS11Q9H270 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VPS11Q9H270 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VPS11Q9H270 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.34■□□□□ 0.21
VPS11Q9H270 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.34■□□□□ 0.21
VPS11Q9H270 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.34■□□□□ 0.21
VPS11Q9H270 AL356488.2-201ENST00000602755 427 ntBASIC16.34■□□□□ 0.21
VPS11Q9H270 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS11Q9H270 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS11Q9H270 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS11Q9H270 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.34■□□□□ 0.21
VPS11Q9H270 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VPS11Q9H270 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.21
VPS11Q9H270 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VPS11Q9H270 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
VPS11Q9H270 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS11Q9H270 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
VPS11Q9H270 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS11Q9H270 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
VPS11Q9H270 AC136621.1-201ENST00000624017 2304 ntBASIC16.33■□□□□ 0.2
VPS11Q9H270 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS11Q9H270 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VPS11Q9H270 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS11Q9H270 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS11Q9H270 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.33■□□□□ 0.2
VPS11Q9H270 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
VPS11Q9H270 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VPS11Q9H270 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS11Q9H270 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS11Q9H270 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
VPS11Q9H270 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.33■□□□□ 0.2
VPS11Q9H270 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms