Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 AL139384.1-201ENST00000612143 3047 ntBASIC17.27■□□□□ 0.36
LMO3Q8TAP4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 AL133215.2-201ENST00000609242 977 ntBASIC17.27■□□□□ 0.36
LMO3Q8TAP4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.27■□□□□ 0.36
LMO3Q8TAP4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
LMO3Q8TAP4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
LMO3Q8TAP4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LMO3Q8TAP4 CICP13-201ENST00000422015 2789 ntBASIC17.27■□□□□ 0.35
LMO3Q8TAP4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LMO3Q8TAP4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
LMO3Q8TAP4 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LMO3Q8TAP4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.27■□□□□ 0.35
LMO3Q8TAP4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 AC092384.3-202ENST00000564646 2873 ntBASIC17.26■□□□□ 0.35
LMO3Q8TAP4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 AC105021.1-202ENST00000570572 669 ntBASIC17.26■□□□□ 0.35
LMO3Q8TAP4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 KRT8P37-201ENST00000451609 1420 ntBASIC17.26■□□□□ 0.35
LMO3Q8TAP4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 AC092850.2-201ENST00000623821 2697 ntBASIC17.26■□□□□ 0.35
LMO3Q8TAP4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.26■□□□□ 0.35
LMO3Q8TAP4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.26■□□□□ 0.35
LMO3Q8TAP4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 CNN2P11-201ENST00000429351 262 ntBASIC17.25■□□□□ 0.35
LMO3Q8TAP4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 AC004967.1-201ENST00000453589 447 ntBASIC17.25■□□□□ 0.35
LMO3Q8TAP4 AL512356.2-201ENST00000546955 174 ntBASIC17.25■□□□□ 0.35
LMO3Q8TAP4 AP001059.3-201ENST00000619053 235 ntBASIC17.25■□□□□ 0.35
LMO3Q8TAP4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LMO3Q8TAP4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LMO3Q8TAP4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms