Protein–RNA interactions for Protein: Q8ND04

SMG8, Protein SMG8, humanhuman

Known RBP Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8Q8ND04 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SMG8Q8ND04 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SMG8Q8ND04 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 AC098614.1-201ENST00000368528 745 ntBASIC17.33■□□□□ 0.36
SMG8Q8ND04 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 HAUS4P1-201ENST00000406739 1145 ntBASIC17.33■□□□□ 0.36
SMG8Q8ND04 MEP1AP4-201ENST00000423244 1087 ntBASIC17.33■□□□□ 0.36
SMG8Q8ND04 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
SMG8Q8ND04 MEIS3P1-201ENST00000495167 958 ntBASIC17.33■□□□□ 0.36
SMG8Q8ND04 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SMG8Q8ND04 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.33■□□□□ 0.36
SMG8Q8ND04 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SMG8Q8ND04 AC006449.6-201ENST00000612330 2296 ntBASIC17.33■□□□□ 0.36
SMG8Q8ND04 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.33■□□□□ 0.36
SMG8Q8ND04 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMG8Q8ND04 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 RPL13P2-201ENST00000440687 659 ntBASIC17.32■□□□□ 0.36
SMG8Q8ND04 TARDBPP1-201ENST00000442013 1203 ntBASIC17.32■□□□□ 0.36
SMG8Q8ND04 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 TIMM17BP1-201ENST00000545713 516 ntBASIC17.32■□□□□ 0.36
SMG8Q8ND04 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SMG8Q8ND04 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMG8Q8ND04 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 AP001282.1-201ENST00000531301 1499 ntBASIC17.31■□□□□ 0.36
SMG8Q8ND04 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMG8Q8ND04 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 MYCLP2-201ENST00000449268 967 ntBASIC17.31■□□□□ 0.36
SMG8Q8ND04 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 ELK1P1-201ENST00000485699 580 ntBASIC17.31■□□□□ 0.36
SMG8Q8ND04 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 AC123567.1-201ENST00000548294 1261 ntBASIC17.31■□□□□ 0.36
SMG8Q8ND04 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 CTBP2P3-201ENST00000585629 1255 ntBASIC17.31■□□□□ 0.36
SMG8Q8ND04 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.31■□□□□ 0.36
SMG8Q8ND04 IGHV3-72-202ENST00000621503 303 ntBASIC17.31■□□□□ 0.36
SMG8Q8ND04 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms