Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RGPD4Q7Z3J3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RGPD4Q7Z3J3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.99■□□□□ 0.79
RGPD4Q7Z3J3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 HIST2H2BB-201ENST00000449108 381 ntBASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 POU5F1P6-201ENST00000466990 990 ntBASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 MIR3147-201ENST00000577811 66 ntBASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 AP001002.3-201ENST00000623482 206 ntBASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 BX539320.1-201ENST00000623759 877 ntBASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.98■□□□□ 0.79
RGPD4Q7Z3J3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 FGFR3P1-201ENST00000449999 601 ntBASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RGPD4Q7Z3J3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 GHSR-202ENST00000427970 912 ntBASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 AC011742.3-201ENST00000439053 820 ntBASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 AC005357.2-202ENST00000590507 1060 ntBASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 WT1-AS_6.1-201ENST00000614919 121 ntBASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 ENPP7P14-201ENST00000621765 1040 ntBASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RGPD4Q7Z3J3 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RGPD4Q7Z3J3 POM121L8P-201ENST00000417732 1281 ntBASIC19.95■□□□□ 0.78
RGPD4Q7Z3J3 POM121L9P-203ENST00000441984 1285 ntBASIC19.95■□□□□ 0.78
RGPD4Q7Z3J3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC19.95■□□□□ 0.78
RGPD4Q7Z3J3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC19.95■□□□□ 0.78
RGPD4Q7Z3J3 AC073352.2-201ENST00000609385 439 ntBASIC19.95■□□□□ 0.78
RGPD4Q7Z3J3 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
RGPD4Q7Z3J3 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms