Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
RPL39P62891 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 SLC22A20-204ENST00000530038 1673 ntBASIC11.52□□□□□ -0.57
RPL39P62891 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
RPL39P62891 AC016734.2-201ENST00000624325 1377 ntBASIC11.52□□□□□ -0.57
RPL39P62891 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
RPL39P62891 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
RPL39P62891 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC11.52□□□□□ -0.57
RPL39P62891 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 AL592424.1-201ENST00000563624 1536 ntBASIC11.51□□□□□ -0.57
RPL39P62891 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RPL39P62891 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.51□□□□□ -0.57
RPL39P62891 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.51□□□□□ -0.57
RPL39P62891 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.51□□□□□ -0.57
RPL39P62891 PAWRP1-201ENST00000451083 565 ntBASIC11.51□□□□□ -0.57
RPL39P62891 AC087163.2-201ENST00000457299 853 ntBASIC11.51□□□□□ -0.57
RPL39P62891 TOB2P1-201ENST00000469761 992 ntBASIC11.51□□□□□ -0.57
RPL39P62891 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.51□□□□□ -0.57
RPL39P62891 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
RPL39P62891 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 AC020765.3-201ENST00000613051 740 ntBASIC11.51□□□□□ -0.57
RPL39P62891 REXO1L3P-201ENST00000622202 1288 ntBASIC11.51□□□□□ -0.57
RPL39P62891 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 AC005622.1-201ENST00000636801 1703 ntBASIC11.51□□□□□ -0.57
RPL39P62891 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 AC087481.3-201ENST00000602886 1894 ntBASIC11.51□□□□□ -0.57
RPL39P62891 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
RPL39P62891 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
RPL39P62891 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.51□□□□□ -0.57
RPL39P62891 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
RPL39P62891 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.5□□□□□ -0.57
RPL39P62891 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.5□□□□□ -0.57
RPL39P62891 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.5□□□□□ -0.57
RPL39P62891 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
RPL39P62891 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
RPL39P62891 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
RPL39P62891 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms