Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLCN3P51790 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CLCN3P51790 AL662844.4-201ENST00000606367 2838 ntBASIC17.72■□□□□ 0.43
CLCN3P51790 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.72■□□□□ 0.43
CLCN3P51790 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CLCN3P51790 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CLCN3P51790 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
CLCN3P51790 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.72■□□□□ 0.43
CLCN3P51790 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN3P51790 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN3P51790 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN3P51790 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN3P51790 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
CLCN3P51790 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLCN3P51790 BNIP3P1-202ENST00000550043 1585 ntBASIC17.71■□□□□ 0.43
CLCN3P51790 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CLCN3P51790 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 FO393414.2-201ENST00000405153 598 ntBASIC17.71■□□□□ 0.43
CLCN3P51790 DFFBP1-201ENST00000433250 979 ntBASIC17.71■□□□□ 0.43
CLCN3P51790 AL353779.1-201ENST00000434793 351 ntBASIC17.71■□□□□ 0.43
CLCN3P51790 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN3P51790 GAPDHP21-201ENST00000450301 1010 ntBASIC17.71■□□□□ 0.43
CLCN3P51790 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN3P51790 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.71■□□□□ 0.43
CLCN3P51790 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CLCN3P51790 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN3P51790 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN3P51790 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN3P51790 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.71■□□□□ 0.43
CLCN3P51790 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 CHCHD2P3-201ENST00000603038 451 ntBASIC17.71■□□□□ 0.43
CLCN3P51790 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.71■□□□□ 0.43
CLCN3P51790 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.71■□□□□ 0.43
CLCN3P51790 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CLCN3P51790 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
CLCN3P51790 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CLCN3P51790 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCN3P51790 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN3P51790 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CLCN3P51790 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.7■□□□□ 0.42
CLCN3P51790 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.7■□□□□ 0.42
CLCN3P51790 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CLCN3P51790 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN3P51790 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCN3P51790 AC023310.3-201ENST00000557027 670 ntBASIC17.7■□□□□ 0.42
CLCN3P51790 AC100756.1-201ENST00000562736 682 ntBASIC17.7■□□□□ 0.42
CLCN3P51790 WASH4P-201ENST00000564273 1246 ntBASIC17.7■□□□□ 0.42
CLCN3P51790 AC138749.3-201ENST00000567691 622 ntBASIC17.7■□□□□ 0.42
CLCN3P51790 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 AC074044.1-201ENST00000609673 707 ntBASIC17.7■□□□□ 0.42
CLCN3P51790 AC116165.1-201ENST00000611806 668 ntBASIC17.7■□□□□ 0.42
CLCN3P51790 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLCN3P51790 KRT8P37-201ENST00000451609 1420 ntBASIC17.7■□□□□ 0.42
CLCN3P51790 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 AC063926.2-201ENST00000623766 1308 ntBASIC17.7■□□□□ 0.42
CLCN3P51790 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCN3P51790 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.69■□□□□ 0.42
CLCN3P51790 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN3P51790 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CLCN3P51790 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN3P51790 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCN3P51790 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.69■□□□□ 0.42
CLCN3P51790 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCN3P51790 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCN3P51790 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CLCN3P51790 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms