Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.76■□□□□ 0.75
PDE6BP35913 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PDE6BP35913 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.76■□□□□ 0.75
PDE6BP35913 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PDE6BP35913 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE6BP35913 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.75■□□□□ 0.75
PDE6BP35913 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE6BP35913 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE6BP35913 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE6BP35913 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE6BP35913 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC19.75■□□□□ 0.75
PDE6BP35913 KRT8P13-201ENST00000463294 1010 ntBASIC19.75■□□□□ 0.75
PDE6BP35913 POU5F1P6-201ENST00000466990 990 ntBASIC19.75■□□□□ 0.75
PDE6BP35913 AC106760.1-201ENST00000508690 800 ntBASIC19.75■□□□□ 0.75
PDE6BP35913 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
PDE6BP35913 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE6BP35913 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC19.75■□□□□ 0.75
PDE6BP35913 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE6BP35913 KRT90P-201ENST00000549264 1064 ntBASIC19.75■□□□□ 0.75
PDE6BP35913 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.75■□□□□ 0.75
PDE6BP35913 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PDE6BP35913 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.75■□□□□ 0.75
PDE6BP35913 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PDE6BP35913 AC060834.1-201ENST00000443027 2032 ntBASIC19.75■□□□□ 0.75
PDE6BP35913 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.75■□□□□ 0.75
PDE6BP35913 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PDE6BP35913 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PDE6BP35913 MSTO2P-201ENST00000314835 1709 ntBASIC19.74■□□□□ 0.75
PDE6BP35913 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PDE6BP35913 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 KRT18P64-201ENST00000434946 1219 ntBASIC19.74■□□□□ 0.75
PDE6BP35913 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.74■□□□□ 0.75
PDE6BP35913 ZNF767P-206ENST00000513792 565 ntBASIC19.74■□□□□ 0.75
PDE6BP35913 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 C2orf69P2-201ENST00000562032 1123 ntBASIC19.74■□□□□ 0.75
PDE6BP35913 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 AC005252.2-201ENST00000624630 1141 ntBASIC19.74■□□□□ 0.75
PDE6BP35913 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 USE1-206ENST00000595101 1776 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PDE6BP35913 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.74■□□□□ 0.75
PDE6BP35913 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 BNIP3P1-202ENST00000550043 1585 ntBASIC19.74■□□□□ 0.75
PDE6BP35913 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.74■□□□□ 0.75
PDE6BP35913 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PDE6BP35913 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.73■□□□□ 0.75
PDE6BP35913 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PDE6BP35913 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
PDE6BP35913 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.73■□□□□ 0.75
PDE6BP35913 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms