Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPN3P26045 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN3P26045 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN3P26045 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTPN3P26045 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN3P26045 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN3P26045 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN3P26045 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN3P26045 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PTPN3P26045 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.52■□□□□ 0.24
PTPN3P26045 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN3P26045 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN3P26045 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN3P26045 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
PTPN3P26045 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
PTPN3P26045 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.52■□□□□ 0.24
PTPN3P26045 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN3P26045 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN3P26045 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN3P26045 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.52■□□□□ 0.24
PTPN3P26045 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.52■□□□□ 0.24
PTPN3P26045 AL592309.1-201ENST00000443127 649 ntBASIC16.52■□□□□ 0.24
PTPN3P26045 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PTPN3P26045 YBX1P5-201ENST00000509441 847 ntBASIC16.52■□□□□ 0.24
PTPN3P26045 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.52■□□□□ 0.24
PTPN3P26045 AC105339.1-204ENST00000636249 355 ntBASIC16.52■□□□□ 0.24
PTPN3P26045 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTPN3P26045 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.52■□□□□ 0.23
PTPN3P26045 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.52■□□□□ 0.23
PTPN3P26045 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN3P26045 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN3P26045 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.52■□□□□ 0.23
PTPN3P26045 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTPN3P26045 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.52■□□□□ 0.23
PTPN3P26045 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN3P26045 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTPN3P26045 AC046158.3-201ENST00000624947 2558 ntBASIC16.51■□□□□ 0.23
PTPN3P26045 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN3P26045 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
PTPN3P26045 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN3P26045 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTPN3P26045 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
PTPN3P26045 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 FAM220BP-201ENST00000377689 816 ntBASIC16.51■□□□□ 0.23
PTPN3P26045 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN3P26045 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.51■□□□□ 0.23
PTPN3P26045 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN3P26045 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.51■□□□□ 0.23
PTPN3P26045 AC024267.1-201ENST00000582320 895 ntBASIC16.51■□□□□ 0.23
PTPN3P26045 MIR4469-201ENST00000583919 79 ntBASIC16.51■□□□□ 0.23
PTPN3P26045 AC010327.4-202ENST00000591484 748 ntBASIC16.51■□□□□ 0.23
PTPN3P26045 AC022145.2-201ENST00000598203 171 ntBASIC16.51■□□□□ 0.23
PTPN3P26045 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTPN3P26045 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 AC084121.4-201ENST00000641598 221 ntBASIC16.51■□□□□ 0.23
PTPN3P26045 AF228730.8-201ENST00000642140 221 ntBASIC16.51■□□□□ 0.23
PTPN3P26045 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.51■□□□□ 0.23
PTPN3P26045 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN3P26045 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
PTPN3P26045 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.51■□□□□ 0.23
PTPN3P26045 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTPN3P26045 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.5■□□□□ 0.23
PTPN3P26045 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.5■□□□□ 0.23
PTPN3P26045 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PTPN3P26045 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTPN3P26045 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms