Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.59■□□□□ 0.57
BMP3P12645 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
BMP3P12645 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 HAUS4P1-201ENST00000406739 1145 ntBASIC18.59■□□□□ 0.57
BMP3P12645 NME2P1-201ENST00000426182 414 ntBASIC18.59■□□□□ 0.57
BMP3P12645 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.59■□□□□ 0.57
BMP3P12645 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.59■□□□□ 0.57
BMP3P12645 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.59■□□□□ 0.57
BMP3P12645 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
BMP3P12645 AC023310.3-201ENST00000557027 670 ntBASIC18.59■□□□□ 0.57
BMP3P12645 AC100756.1-201ENST00000562736 682 ntBASIC18.59■□□□□ 0.57
BMP3P12645 AC138749.3-201ENST00000567691 622 ntBASIC18.59■□□□□ 0.57
BMP3P12645 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.59■□□□□ 0.57
BMP3P12645 AC116165.1-201ENST00000611806 668 ntBASIC18.59■□□□□ 0.57
BMP3P12645 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.59■□□□□ 0.57
BMP3P12645 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.59■□□□□ 0.57
BMP3P12645 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
BMP3P12645 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.59■□□□□ 0.57
BMP3P12645 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
BMP3P12645 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.59■□□□□ 0.57
BMP3P12645 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
BMP3P12645 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
BMP3P12645 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BMP3P12645 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
BMP3P12645 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
BMP3P12645 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
BMP3P12645 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.58■□□□□ 0.56
BMP3P12645 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 COX5BP8-201ENST00000416911 349 ntBASIC18.58■□□□□ 0.56
BMP3P12645 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.58■□□□□ 0.56
BMP3P12645 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC18.58■□□□□ 0.56
BMP3P12645 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
BMP3P12645 AC055876.2-201ENST00000531834 546 ntBASIC18.58■□□□□ 0.56
BMP3P12645 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.58■□□□□ 0.56
BMP3P12645 TIMM17BP1-201ENST00000545713 516 ntBASIC18.58■□□□□ 0.56
BMP3P12645 CR383656.12-201ENST00000549567 513 ntBASIC18.58■□□□□ 0.56
BMP3P12645 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
BMP3P12645 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.58■□□□□ 0.56
BMP3P12645 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.58■□□□□ 0.56
BMP3P12645 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.58■□□□□ 0.56
BMP3P12645 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.58■□□□□ 0.56
BMP3P12645 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.58■□□□□ 0.56
BMP3P12645 Z97205.2-201ENST00000564697 1639 ntBASIC18.58■□□□□ 0.56
BMP3P12645 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
BMP3P12645 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
BMP3P12645 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.58■□□□□ 0.56
BMP3P12645 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
BMP3P12645 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
BMP3P12645 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.58■□□□□ 0.56
BMP3P12645 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BMP3P12645 AC006449.6-201ENST00000612330 2296 ntBASIC18.57■□□□□ 0.56
BMP3P12645 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.57■□□□□ 0.56
BMP3P12645 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.57■□□□□ 0.56
BMP3P12645 DGCR5-201ENST00000399539 862 ntBASIC18.57■□□□□ 0.56
BMP3P12645 MEP1AP4-201ENST00000423244 1087 ntBASIC18.57■□□□□ 0.56
BMP3P12645 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.57■□□□□ 0.56
BMP3P12645 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.57■□□□□ 0.56
BMP3P12645 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.57■□□□□ 0.56
BMP3P12645 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.57■□□□□ 0.56
BMP3P12645 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.57■□□□□ 0.56
BMP3P12645 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
BMP3P12645 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 AP001282.1-201ENST00000531301 1499 ntBASIC18.57■□□□□ 0.56
BMP3P12645 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.57■□□□□ 0.56
BMP3P12645 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
BMP3P12645 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.57■□□□□ 0.56
BMP3P12645 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms