Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.66■□□□□ 0.26
RHOP08100 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RHOP08100 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHOP08100 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RHOP08100 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
RHOP08100 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHOP08100 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHOP08100 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHOP08100 AC012313.1-201ENST00000593393 3059 ntBASIC16.66■□□□□ 0.26
RHOP08100 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHOP08100 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHOP08100 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RHOP08100 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.65■□□□□ 0.26
RHOP08100 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.65■□□□□ 0.26
RHOP08100 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
RHOP08100 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RHOP08100 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.65■□□□□ 0.26
RHOP08100 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.65■□□□□ 0.26
RHOP08100 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.65■□□□□ 0.26
RHOP08100 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
RHOP08100 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 AL442647.2-201ENST00000429864 857 ntBASIC16.65■□□□□ 0.26
RHOP08100 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.65■□□□□ 0.26
RHOP08100 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.65■□□□□ 0.26
RHOP08100 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.65■□□□□ 0.26
RHOP08100 SNX29P1-201ENST00000548357 1007 ntBASIC16.65■□□□□ 0.26
RHOP08100 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
RHOP08100 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.65■□□□□ 0.26
RHOP08100 BTNL10-201ENST00000595971 695 ntBASIC16.65■□□□□ 0.26
RHOP08100 MIR6775-201ENST00000617557 69 ntBASIC16.65■□□□□ 0.26
RHOP08100 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.65■□□□□ 0.26
RHOP08100 COX11-210ENST00000639671 696 ntBASIC16.65■□□□□ 0.26
RHOP08100 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RHOP08100 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.65■□□□□ 0.26
RHOP08100 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.65■□□□□ 0.26
RHOP08100 REXO1L8P-201ENST00000604378 1897 ntBASIC16.65■□□□□ 0.26
RHOP08100 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RHOP08100 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RHOP08100 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
RHOP08100 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.64■□□□□ 0.25
RHOP08100 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.64■□□□□ 0.25
RHOP08100 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.64■□□□□ 0.25
RHOP08100 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.64■□□□□ 0.25
RHOP08100 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.64■□□□□ 0.25
RHOP08100 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.64■□□□□ 0.25
RHOP08100 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.64■□□□□ 0.25
RHOP08100 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.64■□□□□ 0.25
RHOP08100 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.64■□□□□ 0.25
RHOP08100 USP32P1-208ENST00000506594 1164 ntBASIC16.64■□□□□ 0.25
RHOP08100 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.64■□□□□ 0.25
RHOP08100 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.64■□□□□ 0.25
RHOP08100 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RHOP08100 AC133539.2-201ENST00000604757 467 ntBASIC16.64■□□□□ 0.25
RHOP08100 AC133552.6-201ENST00000613406 534 ntBASIC16.64■□□□□ 0.25
RHOP08100 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 AC005332.8-201ENST00000622750 2735 ntBASIC16.64■□□□□ 0.25
RHOP08100 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
RHOP08100 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.64■□□□□ 0.25
RHOP08100 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.64■□□□□ 0.25
RHOP08100 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.64■□□□□ 0.25
RHOP08100 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.64■□□□□ 0.25
RHOP08100 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
RHOP08100 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RHOP08100 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
RHOP08100 KRT8P22-201ENST00000562317 1415 ntBASIC16.63■□□□□ 0.25
RHOP08100 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms