Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXN1O15353 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 HLA-H-201ENST00000383620 1096 ntBASIC19.29■□□□□ 0.68
FOXN1O15353 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXN1O15353 CALR4P-201ENST00000431943 946 ntBASIC19.29■□□□□ 0.68
FOXN1O15353 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXN1O15353 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXN1O15353 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.29■□□□□ 0.68
FOXN1O15353 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXN1O15353 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
FOXN1O15353 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.29■□□□□ 0.68
FOXN1O15353 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXN1O15353 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXN1O15353 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
FOXN1O15353 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.29■□□□□ 0.68
FOXN1O15353 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN1O15353 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
FOXN1O15353 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXN1O15353 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXN1O15353 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
FOXN1O15353 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXN1O15353 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN1O15353 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN1O15353 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN1O15353 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXN1O15353 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXN1O15353 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXN1O15353 BANF1P1-201ENST00000553684 263 ntBASIC19.28■□□□□ 0.68
FOXN1O15353 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXN1O15353 PIGL-212ENST00000581006 554 ntTSL 4 BASIC19.28■□□□□ 0.68
FOXN1O15353 HCG18-245ENST00000602550 559 ntTSL 4 BASIC19.28■□□□□ 0.68
FOXN1O15353 AL133215.2-201ENST00000609242 977 ntBASIC19.28■□□□□ 0.68
FOXN1O15353 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXN1O15353 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXN1O15353 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN1O15353 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN1O15353 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
FOXN1O15353 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.28■□□□□ 0.68
FOXN1O15353 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN1O15353 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
FOXN1O15353 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXN1O15353 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC19.28■□□□□ 0.68
FOXN1O15353 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
FOXN1O15353 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXN1O15353 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.27■□□□□ 0.68
FOXN1O15353 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXN1O15353 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXN1O15353 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXN1O15353 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
FOXN1O15353 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXN1O15353 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
FOXN1O15353 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
FOXN1O15353 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.68
FOXN1O15353 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
FOXN1O15353 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
FOXN1O15353 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC19.27■□□□□ 0.68
FOXN1O15353 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXN1O15353 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC19.27■□□□□ 0.68
FOXN1O15353 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
FOXN1O15353 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC19.27■□□□□ 0.68
FOXN1O15353 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.27■□□□□ 0.68
FOXN1O15353 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.27■□□□□ 0.68
FOXN1O15353 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
FOXN1O15353 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.27■□□□□ 0.68
FOXN1O15353 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.27■□□□□ 0.68
FOXN1O15353 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.27■□□□□ 0.68
FOXN1O15353 AC073389.1-201ENST00000595595 795 ntBASIC19.27■□□□□ 0.68
FOXN1O15353 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.27■□□□□ 0.68
FOXN1O15353 RPSAP52-203ENST00000622976 1023 ntBASIC19.27■□□□□ 0.68
FOXN1O15353 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
FOXN1O15353 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.27■□□□□ 0.67
FOXN1O15353 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.27■□□□□ 0.67
FOXN1O15353 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.27■□□□□ 0.67
FOXN1O15353 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXN1O15353 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXN1O15353 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.27■□□□□ 0.67
FOXN1O15353 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
FOXN1O15353 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
FOXN1O15353 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXN1O15353 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXN1O15353 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXN1O15353 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.26■□□□□ 0.67
FOXN1O15353 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXN1O15353 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC19.26■□□□□ 0.67
FOXN1O15353 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
FOXN1O15353 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
FOXN1O15353 AC006033.1-201ENST00000440505 426 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms