Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC27.14■■□□□ 1.93
CUX2O14529 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC27.14■■□□□ 1.93
CUX2O14529 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC27.14■■□□□ 1.93
CUX2O14529 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CUX2O14529 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.93
CUX2O14529 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.93
CUX2O14529 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
CUX2O14529 HNRNPA1P63-201ENST00000427917 963 ntBASIC27.13■■□□□ 1.93
CUX2O14529 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC27.13■■□□□ 1.93
CUX2O14529 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC27.13■■□□□ 1.93
CUX2O14529 IFT20-206ENST00000578122 834 ntTSL 2 BASIC27.13■■□□□ 1.93
CUX2O14529 IFT20-208ENST00000578985 831 ntTSL 3 BASIC27.13■■□□□ 1.93
CUX2O14529 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC27.13■■□□□ 1.93
CUX2O14529 CD276-203ENST00000537340 2439 ntTSL 2 BASIC27.13■■□□□ 1.93
CUX2O14529 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC27.13■■□□□ 1.93
CUX2O14529 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
CUX2O14529 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 DNAJB1P1-201ENST00000429417 1024 ntBASIC27.13■■□□□ 1.93
CUX2O14529 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC27.13■■□□□ 1.93
CUX2O14529 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC27.13■■□□□ 1.93
CUX2O14529 NSD1-211ENST00000511258 809 ntTSL 3 BASIC27.13■■□□□ 1.93
CUX2O14529 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
CUX2O14529 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CUX2O14529 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
CUX2O14529 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC27.13■■□□□ 1.93
CUX2O14529 AL805961.1-201ENST00000642026 753 ntBASIC27.13■■□□□ 1.93
CUX2O14529 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC27.12■■□□□ 1.93
CUX2O14529 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 RELA-227ENST00000615805 2236 ntTSL 5 BASIC27.12■■□□□ 1.93
CUX2O14529 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC27.12■■□□□ 1.93
CUX2O14529 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC27.12■■□□□ 1.93
CUX2O14529 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC27.12■■□□□ 1.93
CUX2O14529 OARD1-204ENST00000464633 717 ntTSL 2 BASIC27.12■■□□□ 1.93
CUX2O14529 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC27.12■■□□□ 1.93
CUX2O14529 RNA5SP486-201ENST00000515961 83 ntBASIC27.12■■□□□ 1.93
CUX2O14529 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC27.12■■□□□ 1.93
CUX2O14529 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 ZBTB45P2-201ENST00000452245 1531 ntBASIC27.12■■□□□ 1.93
CUX2O14529 GGT4P-201ENST00000623672 1708 ntBASIC27.12■■□□□ 1.93
CUX2O14529 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CUX2O14529 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
CUX2O14529 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC27.11■■□□□ 1.93
CUX2O14529 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CUX2O14529 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC27.11■■□□□ 1.93
CUX2O14529 KSR1-207ENST00000578981 748 ntTSL 4 BASIC27.11■■□□□ 1.93
CUX2O14529 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC27.11■■□□□ 1.93
CUX2O14529 AC132938.4-201ENST00000623835 848 ntBASIC27.11■■□□□ 1.93
CUX2O14529 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
CUX2O14529 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CUX2O14529 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC27.1■■□□□ 1.93
CUX2O14529 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CUX2O14529 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CUX2O14529 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC27.1■■□□□ 1.93
CUX2O14529 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CUX2O14529 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC27.1■■□□□ 1.93
CUX2O14529 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CUX2O14529 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CUX2O14529 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CUX2O14529 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC27.1■■□□□ 1.93
CUX2O14529 AL512430.1-201ENST00000392575 860 ntBASIC27.1■■□□□ 1.93
CUX2O14529 AC116345.2-201ENST00000512837 523 ntBASIC27.1■■□□□ 1.93
CUX2O14529 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CUX2O14529 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CUX2O14529 PPY2P-201ENST00000582808 702 ntBASIC27.1■■□□□ 1.93
CUX2O14529 AL031731.1-201ENST00000642131 2094 ntBASIC27.1■■□□□ 1.93
CUX2O14529 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms