Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP17L11C9JVI0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.71■□□□□ 0.59
USP17L11C9JVI0 PRORSD1P-202ENST00000563365 2154 ntBASIC18.71■□□□□ 0.59
USP17L11C9JVI0 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
USP17L11C9JVI0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
USP17L11C9JVI0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 HIST3H2BA-201ENST00000436555 524 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 AL136982.4-201ENST00000437689 1740 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 TIMM17BP1-201ENST00000545713 516 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 AC106886.1-201ENST00000568660 600 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 CTBP2P3-201ENST00000585629 1255 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 CYP4F24P-201ENST00000586049 1580 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 AC025048.3-201ENST00000590609 569 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 AC093726.1-201ENST00000608064 963 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 AC005702.4-201ENST00000618393 416 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 AC020916.1-201ENST00000587762 1774 ntBASIC18.7■□□□□ 0.58
USP17L11C9JVI0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.7■□□□□ 0.58
USP17L11C9JVI0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 AC079776.1-201ENST00000401540 1152 ntBASIC18.69■□□□□ 0.58
USP17L11C9JVI0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 RN7SL837P-201ENST00000463010 287 ntBASIC18.69■□□□□ 0.58
USP17L11C9JVI0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 AC017083.2-201ENST00000608069 979 ntBASIC18.69■□□□□ 0.58
USP17L11C9JVI0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 ME2P1-201ENST00000426028 1970 ntBASIC18.69■□□□□ 0.58
USP17L11C9JVI0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.69■□□□□ 0.58
USP17L11C9JVI0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.68■□□□□ 0.58
USP17L11C9JVI0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms