Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 HMGN1P19-201ENST00000436976 333 ntBASIC15.22■□□□□ 0.03
CLCA1A8K7I4 DNAJB3-202ENST00000449667 1266 ntBASIC15.22■□□□□ 0.03
CLCA1A8K7I4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 AC074386.1-202ENST00000463561 864 ntBASIC15.22■□□□□ 0.03
CLCA1A8K7I4 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 AC027796.2-201ENST00000575326 344 ntBASIC15.22■□□□□ 0.03
CLCA1A8K7I4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 AL078644.1-201ENST00000609881 752 ntBASIC15.22■□□□□ 0.03
CLCA1A8K7I4 C20orf181-201ENST00000623918 480 ntBASIC15.22■□□□□ 0.03
CLCA1A8K7I4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CLCA1A8K7I4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 AC013268.4-201ENST00000637413 2228 ntBASIC15.21■□□□□ 0.03
CLCA1A8K7I4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 AC107918.2-201ENST00000530817 355 ntBASIC15.21■□□□□ 0.03
CLCA1A8K7I4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 AC013467.2-201ENST00000605472 835 ntBASIC15.21■□□□□ 0.03
CLCA1A8K7I4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.21■□□□□ 0.03
CLCA1A8K7I4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.21■□□□□ 0.02
CLCA1A8K7I4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCA1A8K7I4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms