Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 AC000095.1-201ENST00000603208 874 ntBASIC23.64■■□□□ 1.37
HFM1A2PYH4 AC008494.3-201ENST00000606615 944 ntBASIC23.64■■□□□ 1.37
HFM1A2PYH4 AC093726.1-201ENST00000608064 963 ntBASIC23.64■■□□□ 1.37
HFM1A2PYH4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
HFM1A2PYH4 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
HFM1A2PYH4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC23.64■■□□□ 1.37
HFM1A2PYH4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
HFM1A2PYH4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC23.63■■□□□ 1.37
HFM1A2PYH4 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HFM1A2PYH4 OSM-203ENST00000403463 464 ntTSL 3 BASIC23.63■■□□□ 1.37
HFM1A2PYH4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC23.63■■□□□ 1.37
HFM1A2PYH4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HFM1A2PYH4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
HFM1A2PYH4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
HFM1A2PYH4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
HFM1A2PYH4 CLK3P2-201ENST00000427566 1453 ntBASIC23.63■■□□□ 1.37
HFM1A2PYH4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
HFM1A2PYH4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
HFM1A2PYH4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
HFM1A2PYH4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
HFM1A2PYH4 AC026691.1-201ENST00000602502 2017 ntBASIC23.63■■□□□ 1.37
HFM1A2PYH4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC23.63■■□□□ 1.37
HFM1A2PYH4 SUPT20HL2-201ENST00000486479 2409 ntBASIC23.62■■□□□ 1.37
HFM1A2PYH4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 AL513523.2-202ENST00000427283 2040 ntBASIC23.62■■□□□ 1.37
HFM1A2PYH4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HFM1A2PYH4 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HFM1A2PYH4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 ELK1P1-201ENST00000485699 580 ntBASIC23.62■■□□□ 1.37
HFM1A2PYH4 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HFM1A2PYH4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
HFM1A2PYH4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
HFM1A2PYH4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
HFM1A2PYH4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC23.62■■□□□ 1.37
HFM1A2PYH4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC23.61■■□□□ 1.37
HFM1A2PYH4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
HFM1A2PYH4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 AC087499.6-201ENST00000411576 835 ntBASIC23.6■■□□□ 1.37
HFM1A2PYH4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
HFM1A2PYH4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
HFM1A2PYH4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms