Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD8Q9HCK8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CHD8Q9HCK8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.54■■□□□ 1.2
CHD8Q9HCK8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHD8Q9HCK8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CHD8Q9HCK8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
CHD8Q9HCK8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.53■■□□□ 1.2
CHD8Q9HCK8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC22.53■■□□□ 1.2
CHD8Q9HCK8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CHD8Q9HCK8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD8Q9HCK8 KRT18P5-201ENST00000436075 1291 ntBASIC22.52■■□□□ 1.2
CHD8Q9HCK8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
CHD8Q9HCK8 AL031602.1-201ENST00000633169 911 ntBASIC22.52■■□□□ 1.2
CHD8Q9HCK8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.52■■□□□ 1.2
CHD8Q9HCK8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.52■■□□□ 1.2
CHD8Q9HCK8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CHD8Q9HCK8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CHD8Q9HCK8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CHD8Q9HCK8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.52■■□□□ 1.2
CHD8Q9HCK8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.52■■□□□ 1.2
CHD8Q9HCK8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.52■■□□□ 1.19
CHD8Q9HCK8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.51■■□□□ 1.19
CHD8Q9HCK8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHD8Q9HCK8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
CHD8Q9HCK8 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHD8Q9HCK8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.51■■□□□ 1.19
CHD8Q9HCK8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CHD8Q9HCK8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CHD8Q9HCK8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD8Q9HCK8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD8Q9HCK8 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD8Q9HCK8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD8Q9HCK8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
CHD8Q9HCK8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
CHD8Q9HCK8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CHD8Q9HCK8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.5■■□□□ 1.19
CHD8Q9HCK8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.49■■□□□ 1.19
CHD8Q9HCK8 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.49■■□□□ 1.19
CHD8Q9HCK8 MIR4767-201ENST00000582827 78 ntBASIC22.49■■□□□ 1.19
CHD8Q9HCK8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CHD8Q9HCK8 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD8Q9HCK8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.49■■□□□ 1.19
CHD8Q9HCK8 AC027682.1-201ENST00000562846 899 ntBASIC22.49■■□□□ 1.19
CHD8Q9HCK8 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CHD8Q9HCK8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CHD8Q9HCK8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
CHD8Q9HCK8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.48■■□□□ 1.19
CHD8Q9HCK8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.48■■□□□ 1.19
CHD8Q9HCK8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CHD8Q9HCK8 AF131216.4-201ENST00000638924 1588 ntBASIC22.47■■□□□ 1.19
CHD8Q9HCK8 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHD8Q9HCK8 AC008764.7-201ENST00000593779 1081 ntBASIC22.47■■□□□ 1.19
CHD8Q9HCK8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.47■■□□□ 1.19
CHD8Q9HCK8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CHD8Q9HCK8 DUX4L2-201ENST00000561772 1275 ntBASIC22.46■■□□□ 1.19
CHD8Q9HCK8 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.46■■□□□ 1.19
CHD8Q9HCK8 DUX4L6-201ENST00000626483 1275 ntBASIC22.46■■□□□ 1.19
CHD8Q9HCK8 DUX4L1-201ENST00000627662 1275 ntBASIC22.46■■□□□ 1.19
CHD8Q9HCK8 DUX4L8-201ENST00000629013 1275 ntBASIC22.46■■□□□ 1.19
CHD8Q9HCK8 DUX4L3-201ENST00000630187 1275 ntBASIC22.46■■□□□ 1.19
CHD8Q9HCK8 DUX4L7-201ENST00000630678 1275 ntBASIC22.46■■□□□ 1.19
CHD8Q9HCK8 DUX4L5-201ENST00000630834 1275 ntBASIC22.46■■□□□ 1.19
CHD8Q9HCK8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CHD8Q9HCK8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CHD8Q9HCK8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
CHD8Q9HCK8 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC22.46■■□□□ 1.19
CHD8Q9HCK8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.46■■□□□ 1.19
CHD8Q9HCK8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CHD8Q9HCK8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
CHD8Q9HCK8 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.45■■□□□ 1.19
CHD8Q9HCK8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CHD8Q9HCK8 SYT6-210ENST00000641643 1587 ntBASIC22.45■■□□□ 1.18
CHD8Q9HCK8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHD8Q9HCK8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.45■■□□□ 1.18
CHD8Q9HCK8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.45■■□□□ 1.18
CHD8Q9HCK8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHD8Q9HCK8 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CHD8Q9HCK8 ABCB10P3-201ENST00000561950 2166 ntBASIC22.45■■□□□ 1.18
CHD8Q9HCK8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.45■■□□□ 1.18
CHD8Q9HCK8 AC004911.1-201ENST00000416316 871 ntBASIC22.45■■□□□ 1.18
CHD8Q9HCK8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CHD8Q9HCK8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.44■■□□□ 1.18
CHD8Q9HCK8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.44■■□□□ 1.18
CHD8Q9HCK8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.44■■□□□ 1.18
CHD8Q9HCK8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CHD8Q9HCK8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.44■■□□□ 1.18
CHD8Q9HCK8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.44■■□□□ 1.18
CHD8Q9HCK8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CHD8Q9HCK8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHD8Q9HCK8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CHD8Q9HCK8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.43■■□□□ 1.18
CHD8Q9HCK8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
CHD8Q9HCK8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CHD8Q9HCK8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.43■■□□□ 1.18
CHD8Q9HCK8 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CHD8Q9HCK8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.42■■□□□ 1.18
CHD8Q9HCK8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CHD8Q9HCK8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CHD8Q9HCK8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.41■■□□□ 1.18
CHD8Q9HCK8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms