Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga6Q91XY2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdhga6Q91XY2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga6Q91XY2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga6Q91XY2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga6Q91XY2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga6Q91XY2 Gm10399-202ENSMUST00000202768 748 ntBASIC21.04■□□□□ 0.96
Pcdhga6Q91XY2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga6Q91XY2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdhga6Q91XY2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga6Q91XY2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga6Q91XY2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga6Q91XY2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga6Q91XY2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga6Q91XY2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga6Q91XY2 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Pcdhga6Q91XY2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga6Q91XY2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga6Q91XY2 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pcdhga6Q91XY2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Pcdhga6Q91XY2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pcdhga6Q91XY2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga6Q91XY2 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Pcdhga6Q91XY2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga6Q91XY2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga6Q91XY2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga6Q91XY2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pcdhga6Q91XY2 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Pcdhga6Q91XY2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdhga6Q91XY2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga6Q91XY2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga6Q91XY2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.99■□□□□ 0.95
Pcdhga6Q91XY2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.99■□□□□ 0.95
Pcdhga6Q91XY2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga6Q91XY2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdhga6Q91XY2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.98■□□□□ 0.95
Pcdhga6Q91XY2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga6Q91XY2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhga6Q91XY2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhga6Q91XY2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga6Q91XY2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
Pcdhga6Q91XY2 Gm18284-201ENSMUST00000172604 624 ntBASIC20.97■□□□□ 0.95
Pcdhga6Q91XY2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhga6Q91XY2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 Golgb1-201ENSMUST00000023534 498 ntBASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhga6Q91XY2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga6Q91XY2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhga6Q91XY2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga6Q91XY2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Pcdhga6Q91XY2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga6Q91XY2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga6Q91XY2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga6Q91XY2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhga6Q91XY2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.94■□□□□ 0.94
Pcdhga6Q91XY2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga6Q91XY2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhga6Q91XY2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga6Q91XY2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga6Q91XY2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhga6Q91XY2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms