Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
APLFQ8IW19 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
APLFQ8IW19 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
APLFQ8IW19 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
APLFQ8IW19 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.16■■□□□ 1.3
APLFQ8IW19 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
APLFQ8IW19 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.16■■□□□ 1.3
APLFQ8IW19 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
APLFQ8IW19 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
APLFQ8IW19 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
APLFQ8IW19 RP9P-202ENST00000450133 1212 ntBASIC23.15■■□□□ 1.3
APLFQ8IW19 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
APLFQ8IW19 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
APLFQ8IW19 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
APLFQ8IW19 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
APLFQ8IW19 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
APLFQ8IW19 AL139125.2-201ENST00000623134 1869 ntBASIC23.14■■□□□ 1.29
APLFQ8IW19 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.14■■□□□ 1.29
APLFQ8IW19 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.14■■□□□ 1.29
APLFQ8IW19 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.14■■□□□ 1.29
APLFQ8IW19 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
APLFQ8IW19 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
APLFQ8IW19 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
APLFQ8IW19 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
APLFQ8IW19 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
APLFQ8IW19 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.13■■□□□ 1.29
APLFQ8IW19 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.13■■□□□ 1.29
APLFQ8IW19 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
APLFQ8IW19 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
APLFQ8IW19 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
APLFQ8IW19 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.11■■□□□ 1.29
APLFQ8IW19 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
APLFQ8IW19 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
APLFQ8IW19 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.1■■□□□ 1.29
APLFQ8IW19 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
APLFQ8IW19 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.1■■□□□ 1.29
APLFQ8IW19 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.1■■□□□ 1.29
APLFQ8IW19 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
APLFQ8IW19 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
APLFQ8IW19 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
APLFQ8IW19 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.09■■□□□ 1.29
APLFQ8IW19 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
APLFQ8IW19 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
APLFQ8IW19 DUX4L9-201ENST00000449051 1259 ntBASIC23.09■■□□□ 1.29
APLFQ8IW19 AC093536.1-201ENST00000569153 554 ntBASIC23.09■■□□□ 1.29
APLFQ8IW19 RAP2CP1-202ENST00000605179 643 ntBASIC23.09■■□□□ 1.29
APLFQ8IW19 AC074183.2-201ENST00000623112 922 ntBASIC23.09■■□□□ 1.29
APLFQ8IW19 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
APLFQ8IW19 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.09■■□□□ 1.29
APLFQ8IW19 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
APLFQ8IW19 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
APLFQ8IW19 AL035685.1-201ENST00000636663 812 ntBASIC23.08■■□□□ 1.29
APLFQ8IW19 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
APLFQ8IW19 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
APLFQ8IW19 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.07■■□□□ 1.28
APLFQ8IW19 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.07■■□□□ 1.28
APLFQ8IW19 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
APLFQ8IW19 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
APLFQ8IW19 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.06■■□□□ 1.28
APLFQ8IW19 MIR3960-201ENST00000583311 91 ntBASIC23.06■■□□□ 1.28
APLFQ8IW19 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
APLFQ8IW19 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
APLFQ8IW19 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
APLFQ8IW19 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
APLFQ8IW19 AL451085.2-201ENST00000605085 799 ntBASIC23.05■■□□□ 1.28
APLFQ8IW19 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
APLFQ8IW19 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
APLFQ8IW19 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
APLFQ8IW19 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.04■■□□□ 1.28
APLFQ8IW19 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
APLFQ8IW19 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
APLFQ8IW19 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
APLFQ8IW19 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.04■■□□□ 1.28
APLFQ8IW19 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.04■■□□□ 1.28
APLFQ8IW19 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
APLFQ8IW19 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
APLFQ8IW19 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
APLFQ8IW19 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
APLFQ8IW19 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
APLFQ8IW19 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
APLFQ8IW19 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
APLFQ8IW19 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
APLFQ8IW19 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.03■■□□□ 1.28
APLFQ8IW19 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
APLFQ8IW19 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
APLFQ8IW19 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
APLFQ8IW19 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
APLFQ8IW19 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
APLFQ8IW19 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.03■■□□□ 1.28
APLFQ8IW19 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
APLFQ8IW19 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
APLFQ8IW19 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
APLFQ8IW19 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
APLFQ8IW19 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
APLFQ8IW19 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.02■■□□□ 1.28
APLFQ8IW19 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
APLFQ8IW19 BHLHE23-202ENST00000612929 1109 ntBASIC23.02■■□□□ 1.28
APLFQ8IW19 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.02■■□□□ 1.28
APLFQ8IW19 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
APLFQ8IW19 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms