Protein–RNA interactions for Protein: Q6U7R4

Timd4, T-cell immunoglobulin and mucin domain-containing protein 4, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timd4Q6U7R4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Timd4Q6U7R4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Timd4Q6U7R4 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Timd4Q6U7R4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Timd4Q6U7R4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Timd4Q6U7R4 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Timd4Q6U7R4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Timd4Q6U7R4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Timd4Q6U7R4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Timd4Q6U7R4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Timd4Q6U7R4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Timd4Q6U7R4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.82■□□□□ 0.76
Timd4Q6U7R4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Timd4Q6U7R4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Timd4Q6U7R4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.82■□□□□ 0.76
Timd4Q6U7R4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Timd4Q6U7R4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Timd4Q6U7R4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Timd4Q6U7R4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Timd4Q6U7R4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Timd4Q6U7R4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Timd4Q6U7R4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Timd4Q6U7R4 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Timd4Q6U7R4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Timd4Q6U7R4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Timd4Q6U7R4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Timd4Q6U7R4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.79■□□□□ 0.76
Timd4Q6U7R4 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Timd4Q6U7R4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Timd4Q6U7R4 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Timd4Q6U7R4 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Timd4Q6U7R4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.77■□□□□ 0.76
Timd4Q6U7R4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Timd4Q6U7R4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Timd4Q6U7R4 Gm5812-201ENSMUST00000061073 957 ntBASIC19.77■□□□□ 0.76
Timd4Q6U7R4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Timd4Q6U7R4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Timd4Q6U7R4 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Timd4Q6U7R4 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Timd4Q6U7R4 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.76■□□□□ 0.75
Timd4Q6U7R4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Timd4Q6U7R4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Timd4Q6U7R4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.76■□□□□ 0.75
Timd4Q6U7R4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.76■□□□□ 0.75
Timd4Q6U7R4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
Timd4Q6U7R4 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.75■□□□□ 0.75
Timd4Q6U7R4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms