Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Foxa1P35582 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxa1P35582 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxa1P35582 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Foxa1P35582 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Foxa1P35582 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.75■□□□□ 0.75
Foxa1P35582 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.75■□□□□ 0.75
Foxa1P35582 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Foxa1P35582 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Foxa1P35582 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Foxa1P35582 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Foxa1P35582 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Foxa1P35582 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Foxa1P35582 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Foxa1P35582 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Foxa1P35582 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Foxa1P35582 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Foxa1P35582 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.74■□□□□ 0.75
Foxa1P35582 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Foxa1P35582 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Foxa1P35582 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.73■□□□□ 0.75
Foxa1P35582 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.73■□□□□ 0.75
Foxa1P35582 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Foxa1P35582 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxa1P35582 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Foxa1P35582 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxa1P35582 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxa1P35582 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Foxa1P35582 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Foxa1P35582 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxa1P35582 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxa1P35582 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxa1P35582 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Foxa1P35582 Gm43566-201ENSMUST00000196851 808 ntBASIC19.72■□□□□ 0.75
Foxa1P35582 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxa1P35582 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxa1P35582 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Foxa1P35582 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Foxa1P35582 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxa1P35582 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.71■□□□□ 0.75
Foxa1P35582 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Foxa1P35582 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Foxa1P35582 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Foxa1P35582 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxa1P35582 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Foxa1P35582 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Foxa1P35582 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.7■□□□□ 0.74
Foxa1P35582 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Foxa1P35582 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.69■□□□□ 0.74
Foxa1P35582 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Foxa1P35582 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.69■□□□□ 0.74
Foxa1P35582 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxa1P35582 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Foxa1P35582 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Foxa1P35582 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Foxa1P35582 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.68■□□□□ 0.74
Foxa1P35582 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxa1P35582 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Foxa1P35582 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxa1P35582 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxa1P35582 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxa1P35582 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxa1P35582 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.67■□□□□ 0.74
Foxa1P35582 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxa1P35582 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Foxa1P35582 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Foxa1P35582 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Foxa1P35582 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxa1P35582 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Foxa1P35582 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Foxa1P35582 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.66■□□□□ 0.74
Foxa1P35582 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxa1P35582 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxa1P35582 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Foxa1P35582 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxa1P35582 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.65■□□□□ 0.74
Foxa1P35582 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxa1P35582 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Foxa1P35582 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxa1P35582 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.65■□□□□ 0.74
Foxa1P35582 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxa1P35582 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxa1P35582 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Foxa1P35582 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxa1P35582 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Foxa1P35582 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.64■□□□□ 0.73
Foxa1P35582 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxa1P35582 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxa1P35582 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.64■□□□□ 0.73
Foxa1P35582 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Foxa1P35582 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Foxa1P35582 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxa1P35582 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxa1P35582 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Foxa1P35582 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.63■□□□□ 0.73
Foxa1P35582 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.63■□□□□ 0.73
Foxa1P35582 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.63■□□□□ 0.73
Foxa1P35582 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxa1P35582 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.63■□□□□ 0.73
Foxa1P35582 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms