Protein–RNA interactions for Protein: P29037

Tbp, TATA-box-binding protein, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TbpP29037 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.76■□□□□ 0.11
TbpP29037 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TbpP29037 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TbpP29037 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TbpP29037 Gm37136-201ENSMUST00000194368 194 ntBASIC15.75■□□□□ 0.11
TbpP29037 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TbpP29037 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TbpP29037 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TbpP29037 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TbpP29037 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TbpP29037 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TbpP29037 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TbpP29037 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TbpP29037 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TbpP29037 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TbpP29037 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.74■□□□□ 0.11
TbpP29037 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TbpP29037 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TbpP29037 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TbpP29037 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.73■□□□□ 0.11
TbpP29037 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TbpP29037 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TbpP29037 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC15.72■□□□□ 0.11
TbpP29037 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TbpP29037 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.72■□□□□ 0.11
TbpP29037 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TbpP29037 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TbpP29037 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TbpP29037 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TbpP29037 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TbpP29037 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
TbpP29037 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TbpP29037 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TbpP29037 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.71■□□□□ 0.11
TbpP29037 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TbpP29037 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TbpP29037 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TbpP29037 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.71■□□□□ 0.11
TbpP29037 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TbpP29037 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TbpP29037 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
TbpP29037 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TbpP29037 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.7■□□□□ 0.1
TbpP29037 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TbpP29037 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TbpP29037 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.7■□□□□ 0.1
TbpP29037 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TbpP29037 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TbpP29037 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TbpP29037 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TbpP29037 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TbpP29037 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TbpP29037 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TbpP29037 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TbpP29037 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TbpP29037 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TbpP29037 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TbpP29037 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TbpP29037 Gm24970-201ENSMUST00000175582 82 ntBASIC15.69■□□□□ 0.1
TbpP29037 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.69■□□□□ 0.1
TbpP29037 Gm34220-201ENSMUST00000223001 2709 ntBASIC15.69■□□□□ 0.1
TbpP29037 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TbpP29037 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TbpP29037 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TbpP29037 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TbpP29037 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TbpP29037 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TbpP29037 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TbpP29037 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TbpP29037 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TbpP29037 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.68■□□□□ 0.1
TbpP29037 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TbpP29037 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TbpP29037 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.68■□□□□ 0.1
TbpP29037 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TbpP29037 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TbpP29037 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TbpP29037 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TbpP29037 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.68■□□□□ 0.1
TbpP29037 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TbpP29037 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TbpP29037 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TbpP29037 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TbpP29037 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TbpP29037 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TbpP29037 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TbpP29037 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TbpP29037 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TbpP29037 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TbpP29037 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TbpP29037 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms