Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV34A0A0B4J273 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV34A0A0B4J273 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRAV34A0A0B4J273 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV34A0A0B4J273 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV34A0A0B4J273 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.1■□□□□ 0.49
TRAV34A0A0B4J273 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV34A0A0B4J273 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAV34A0A0B4J273 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV34A0A0B4J273 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV34A0A0B4J273 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRAV34A0A0B4J273 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV34A0A0B4J273 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV34A0A0B4J273 AC079834.2-201ENST00000609776 1949 ntBASIC18.09■□□□□ 0.49
TRAV34A0A0B4J273 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAV34A0A0B4J273 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV34A0A0B4J273 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV34A0A0B4J273 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV34A0A0B4J273 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV34A0A0B4J273 SLC6A10P-202ENST00000431994 2058 ntBASIC18.08■□□□□ 0.49
TRAV34A0A0B4J273 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.08■□□□□ 0.49
TRAV34A0A0B4J273 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV34A0A0B4J273 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.08■□□□□ 0.49
TRAV34A0A0B4J273 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV34A0A0B4J273 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRAV34A0A0B4J273 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TRAV34A0A0B4J273 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV34A0A0B4J273 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV34A0A0B4J273 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV34A0A0B4J273 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV34A0A0B4J273 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRAV34A0A0B4J273 AC021231.2-201ENST00000594613 730 ntBASIC18.07■□□□□ 0.48
TRAV34A0A0B4J273 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV34A0A0B4J273 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 AP006261.1-201ENST00000584783 668 ntBASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV34A0A0B4J273 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV34A0A0B4J273 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV34A0A0B4J273 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV34A0A0B4J273 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV34A0A0B4J273 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV34A0A0B4J273 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV34A0A0B4J273 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV34A0A0B4J273 AL359504.2-201ENST00000605506 1601 ntBASIC18.04■□□□□ 0.48
TRAV34A0A0B4J273 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV34A0A0B4J273 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TRAV34A0A0B4J273 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 AC044849.2-201ENST00000606596 710 ntBASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV34A0A0B4J273 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV34A0A0B4J273 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV34A0A0B4J273 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TRAV34A0A0B4J273 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
TRAV34A0A0B4J273 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV34A0A0B4J273 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV34A0A0B4J273 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.02■□□□□ 0.47
TRAV34A0A0B4J273 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV34A0A0B4J273 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 NRG1-221ENST00000614767 762 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV34A0A0B4J273 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms