Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-7A0A075B6A6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-7A0A075B6A6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav6n-7A0A075B6A6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6n-7A0A075B6A6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.11■□□□□ 0.49
Trav6n-7A0A075B6A6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav6n-7A0A075B6A6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav6n-7A0A075B6A6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6n-7A0A075B6A6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6n-7A0A075B6A6 Gm43566-201ENSMUST00000196851 808 ntBASIC18.1■□□□□ 0.49
Trav6n-7A0A075B6A6 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.1■□□□□ 0.49
Trav6n-7A0A075B6A6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6n-7A0A075B6A6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav6n-7A0A075B6A6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav6n-7A0A075B6A6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav6n-7A0A075B6A6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6n-7A0A075B6A6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6n-7A0A075B6A6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6n-7A0A075B6A6 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6n-7A0A075B6A6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.09■□□□□ 0.49
Trav6n-7A0A075B6A6 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6n-7A0A075B6A6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav6n-7A0A075B6A6 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.09■□□□□ 0.49
Trav6n-7A0A075B6A6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6n-7A0A075B6A6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Trav6n-7A0A075B6A6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav6n-7A0A075B6A6 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trav6n-7A0A075B6A6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6n-7A0A075B6A6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6n-7A0A075B6A6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6n-7A0A075B6A6 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav6n-7A0A075B6A6 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.07■□□□□ 0.48
Trav6n-7A0A075B6A6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav6n-7A0A075B6A6 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6n-7A0A075B6A6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6n-7A0A075B6A6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6n-7A0A075B6A6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.05■□□□□ 0.48
Trav6n-7A0A075B6A6 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav6n-7A0A075B6A6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6n-7A0A075B6A6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6n-7A0A075B6A6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6n-7A0A075B6A6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6n-7A0A075B6A6 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
Trav6n-7A0A075B6A6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.04■□□□□ 0.48
Trav6n-7A0A075B6A6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6n-7A0A075B6A6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6n-7A0A075B6A6 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav6n-7A0A075B6A6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6n-7A0A075B6A6 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6n-7A0A075B6A6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6n-7A0A075B6A6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav6n-7A0A075B6A6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trav6n-7A0A075B6A6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.02■□□□□ 0.48
Trav6n-7A0A075B6A6 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6n-7A0A075B6A6 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.02■□□□□ 0.48
Trav6n-7A0A075B6A6 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav6n-7A0A075B6A6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6n-7A0A075B6A6 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.01■□□□□ 0.47
Trav6n-7A0A075B6A6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.01■□□□□ 0.47
Trav6n-7A0A075B6A6 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.01■□□□□ 0.47
Trav6n-7A0A075B6A6 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
Trav6n-7A0A075B6A6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6n-7A0A075B6A6 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6n-7A0A075B6A6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6n-7A0A075B6A6 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav6n-7A0A075B6A6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav6n-7A0A075B6A6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trav6n-7A0A075B6A6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav6n-7A0A075B6A6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Trav6n-7A0A075B6A6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.99■□□□□ 0.47
Trav6n-7A0A075B6A6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms