Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ighv1-55A0A075B5W6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-55A0A075B5W6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-55A0A075B5W6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.84■□□□□ 0.29
Ighv1-55A0A075B5W6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-55A0A075B5W6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-55A0A075B5W6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-55A0A075B5W6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-55A0A075B5W6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-55A0A075B5W6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ighv1-55A0A075B5W6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-55A0A075B5W6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-55A0A075B5W6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC16.83■□□□□ 0.28
Ighv1-55A0A075B5W6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-55A0A075B5W6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-55A0A075B5W6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-55A0A075B5W6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ighv1-55A0A075B5W6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ighv1-55A0A075B5W6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ighv1-55A0A075B5W6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ighv1-55A0A075B5W6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ighv1-55A0A075B5W6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-55A0A075B5W6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-55A0A075B5W6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ighv1-55A0A075B5W6 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-55A0A075B5W6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ighv1-55A0A075B5W6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-55A0A075B5W6 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC16.78■□□□□ 0.28
Ighv1-55A0A075B5W6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-55A0A075B5W6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ighv1-55A0A075B5W6 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv1-55A0A075B5W6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv1-55A0A075B5W6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.76■□□□□ 0.27
Ighv1-55A0A075B5W6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.76■□□□□ 0.27
Ighv1-55A0A075B5W6 Gm5921-201ENSMUST00000075898 882 ntBASIC16.76■□□□□ 0.27
Ighv1-55A0A075B5W6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.75■□□□□ 0.27
Ighv1-55A0A075B5W6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms