Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
R3HCC1Q9Y3T6 AL135999.2-201ENST00000622438 1686 ntBASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 MRPL3P1-201ENST00000400109 1033 ntBASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 AC018712.1-201ENST00000455767 687 ntBASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 SLC25A6P4-201ENST00000586535 553 ntBASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 AL391256.1-201ENST00000443260 1855 ntBASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 AC106881.1-201ENST00000605849 3329 ntBASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
R3HCC1Q9Y3T6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
R3HCC1Q9Y3T6 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 LINC00982-205ENST00000420957 435 ntBASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 ACTG1P4-201ENST00000425123 1122 ntBASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 FDX1P1-201ENST00000449115 551 ntBASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 AC105339.3-201ENST00000560043 636 ntBASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 AC148477.8-201ENST00000624298 468 ntBASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 AC023157.3-201ENST00000619086 2088 ntBASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.67■□□□□ 0.58
R3HCC1Q9Y3T6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
R3HCC1Q9Y3T6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms