Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC090164.2-201ENST00000611487 516 ntBASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 AC004923.1-202ENST00000642106 209 ntBASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
RIMBP3Q9UFD9 OR2K2-202ENST00000374428 1038 ntBASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 AL627231.1-201ENST00000394467 1125 ntBASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 AL391280.1-201ENST00000506969 1062 ntBASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 SOD2-202ENST00000367054 815 ntTSL 2 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 AC103810.10-201ENST00000606504 343 ntBASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 AC073911.3-201ENST00000624401 631 ntBASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
RIMBP3Q9UFD9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 BX323043.1-201ENST00000641006 1765 ntBASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
RIMBP3Q9UFD9 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC24.95■■□□□ 1.59
RIMBP3Q9UFD9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 AC245100.5-201ENST00000452108 331 ntBASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 IGHEP1-201ENST00000521393 651 ntBASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 AC106820.3-201ENST00000561653 397 ntBASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 MIR3677-201ENST00000578964 60 ntBASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
RIMBP3Q9UFD9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 COX20P1-201ENST00000366529 357 ntBASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 AL357563.1-201ENST00000404728 395 ntBASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC24.94■■□□□ 1.58
RIMBP3Q9UFD9 OR10B1P-201ENST00000601666 907 ntBASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms