Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 PRORSD1P-202ENST00000563365 2154 ntBASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 CYP4F24P-201ENST00000586049 1580 ntBASIC14.39□□□□□ -0.11
CLCF1Q9UBD9 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 BTBD7P1-201ENST00000447253 1453 ntBASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 AC011676.5-201ENST00000624864 2660 ntBASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 SPTLC1P1-201ENST00000447199 261 ntBASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 AC190387.1-201ENST00000551683 408 ntBASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 AL033527.5-202ENST00000641632 1098 ntBASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 AL136982.4-201ENST00000437689 1740 ntBASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 REXO1L8P-201ENST00000604378 1897 ntBASIC14.38□□□□□ -0.11
CLCF1Q9UBD9 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 ALOX12P2-203ENST00000570921 1945 ntBASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 AC004840.1-201ENST00000636359 365 ntBASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CLCF1Q9UBD9 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms