Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.39■□□□□ 0.7
SALL1Q9NSC2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SALL1Q9NSC2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SALL1Q9NSC2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SALL1Q9NSC2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SALL1Q9NSC2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SALL1Q9NSC2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
SALL1Q9NSC2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SALL1Q9NSC2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 DGCR5-201ENST00000399539 862 ntBASIC19.39■□□□□ 0.69
SALL1Q9NSC2 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 TPRX2P-201ENST00000535362 881 ntBASIC19.39■□□□□ 0.69
SALL1Q9NSC2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 SPIB-207ENST00000597855 564 ntTSL 4 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 KRT8P37-201ENST00000451609 1420 ntBASIC19.39■□□□□ 0.69
SALL1Q9NSC2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SALL1Q9NSC2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 PUDP-206ENST00000540122 825 ntTSL 2 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 WASH4P-201ENST00000564273 1246 ntBASIC19.38■□□□□ 0.69
SALL1Q9NSC2 RRP7BP-205ENST00000566851 833 ntBASIC19.38■□□□□ 0.69
SALL1Q9NSC2 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 HTR7P1-202ENST00000624664 4411 ntBASIC19.38■□□□□ 0.69
SALL1Q9NSC2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SALL1Q9NSC2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms