Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 UBALD1-205ENST00000590891 2641 ntBASIC18.84■□□□□ 0.61
SH2D4AQ9H788 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
SH2D4AQ9H788 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH2D4AQ9H788 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH2D4AQ9H788 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
SH2D4AQ9H788 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SH2D4AQ9H788 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SH2D4AQ9H788 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SH2D4AQ9H788 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH2D4AQ9H788 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH2D4AQ9H788 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.83■□□□□ 0.61
SH2D4AQ9H788 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.83■□□□□ 0.61
SH2D4AQ9H788 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 AC098614.1-201ENST00000368528 745 ntBASIC18.83■□□□□ 0.6
SH2D4AQ9H788 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 COX5BP8-201ENST00000416911 349 ntBASIC18.83■□□□□ 0.6
SH2D4AQ9H788 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 GNAQP1-201ENST00000444815 1067 ntBASIC18.83■□□□□ 0.6
SH2D4AQ9H788 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 AL592424.1-201ENST00000563624 1536 ntBASIC18.83■□□□□ 0.6
SH2D4AQ9H788 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.83■□□□□ 0.6
SH2D4AQ9H788 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 AC055876.2-201ENST00000531834 546 ntBASIC18.82■□□□□ 0.6
SH2D4AQ9H788 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 SRD5A3P1-201ENST00000603021 949 ntBASIC18.82■□□□□ 0.6
SH2D4AQ9H788 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 AL109936.8-201ENST00000641772 604 ntBASIC18.82■□□□□ 0.6
SH2D4AQ9H788 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH2D4AQ9H788 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 AL136982.4-201ENST00000437689 1740 ntBASIC18.81■□□□□ 0.6
SH2D4AQ9H788 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 KRT17P7-201ENST00000451704 1104 ntBASIC18.81■□□□□ 0.6
SH2D4AQ9H788 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 AC243562.2-201ENST00000561247 970 ntBASIC18.81■□□□□ 0.6
SH2D4AQ9H788 AC074044.1-201ENST00000609673 707 ntBASIC18.81■□□□□ 0.6
SH2D4AQ9H788 AC004461.2-201ENST00000629517 803 ntBASIC18.81■□□□□ 0.6
SH2D4AQ9H788 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.81■□□□□ 0.6
SH2D4AQ9H788 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms