Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CCL13Q99616 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL13Q99616 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CCL13Q99616 AL596087.1-201ENST00000400979 1969 ntBASIC13.6□□□□□ -0.23
CCL13Q99616 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 HLA-H-201ENST00000383620 1096 ntBASIC13.6□□□□□ -0.23
CCL13Q99616 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL13Q99616 TSEN15P1-201ENST00000423257 515 ntBASIC13.6□□□□□ -0.23
CCL13Q99616 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL13Q99616 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCL13Q99616 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL13Q99616 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC13.6□□□□□ -0.23
CCL13Q99616 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CCL13Q99616 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CCL13Q99616 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 AC004449.1-201ENST00000564240 433 ntBASIC13.6□□□□□ -0.23
CCL13Q99616 AC024267.1-201ENST00000582320 895 ntBASIC13.6□□□□□ -0.23
CCL13Q99616 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL13Q99616 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.6□□□□□ -0.23
CCL13Q99616 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL13Q99616 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.6□□□□□ -0.23
CCL13Q99616 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL13Q99616 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL13Q99616 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.6□□□□□ -0.23
CCL13Q99616 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CCL13Q99616 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL13Q99616 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.6□□□□□ -0.23
CCL13Q99616 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CCL13Q99616 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CCL13Q99616 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL13Q99616 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL13Q99616 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL13Q99616 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCL13Q99616 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CCL13Q99616 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCL13Q99616 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL13Q99616 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
CCL13Q99616 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CCL13Q99616 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.59□□□□□ -0.23
CCL13Q99616 GPS2P2-201ENST00000430745 888 ntBASIC13.59□□□□□ -0.23
CCL13Q99616 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL13Q99616 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CCL13Q99616 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL13Q99616 AC026150.2-201ENST00000564693 1156 ntBASIC13.59□□□□□ -0.23
CCL13Q99616 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 RARRES2P9-201ENST00000565168 469 ntBASIC13.59□□□□□ -0.23
CCL13Q99616 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL13Q99616 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL13Q99616 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 AL365330.1-201ENST00000607459 531 ntBASIC13.59□□□□□ -0.23
CCL13Q99616 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CCL13Q99616 LINC00628-201ENST00000628516 1289 ntBASIC13.59□□□□□ -0.23
CCL13Q99616 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL13Q99616 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL13Q99616 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
CCL13Q99616 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 CYP2T1P-202ENST00000641596 2535 ntBASIC13.59□□□□□ -0.23
CCL13Q99616 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CCL13Q99616 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.59□□□□□ -0.23
CCL13Q99616 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.59□□□□□ -0.23
CCL13Q99616 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CCL13Q99616 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.59□□□□□ -0.23
CCL13Q99616 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms