Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 AL033527.5-202ENST00000641632 1098 ntBASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CDK5RAP1Q96SZ6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 AC005052.1-201ENST00000625181 2492 ntBASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 MIR648-201ENST00000385046 94 ntBASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDK5RAP1Q96SZ6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 AL844908.2-201ENST00000609461 460 ntBASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDK5RAP1Q96SZ6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms