Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 BOLA2P3-201ENST00000404566 256 ntBASIC17.12■□□□□ 0.33
CASD1Q96PB1 ACTG1P3-201ENST00000431775 1114 ntBASIC17.12■□□□□ 0.33
CASD1Q96PB1 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 AL162726.2-201ENST00000438986 1017 ntBASIC17.12■□□□□ 0.33
CASD1Q96PB1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 AC233724.13-201ENST00000598383 410 ntBASIC17.12■□□□□ 0.33
CASD1Q96PB1 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 CU634019.7-201ENST00000624153 1185 ntBASIC17.12■□□□□ 0.33
CASD1Q96PB1 FP236241.2-201ENST00000624906 1185 ntBASIC17.12■□□□□ 0.33
CASD1Q96PB1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 AC018665.1-201ENST00000622927 1362 ntBASIC17.12■□□□□ 0.33
CASD1Q96PB1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.12■□□□□ 0.33
CASD1Q96PB1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CASD1Q96PB1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 ME2P1-201ENST00000426028 1970 ntBASIC17.11■□□□□ 0.33
CASD1Q96PB1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 AC092171.3-201ENST00000610122 2651 ntBASIC17.11■□□□□ 0.33
CASD1Q96PB1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 PHKG1P2-201ENST00000457537 863 ntBASIC17.11■□□□□ 0.33
CASD1Q96PB1 AC104989.1-201ENST00000519711 778 ntBASIC17.11■□□□□ 0.33
CASD1Q96PB1 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 MIR5189-201ENST00000577370 114 ntBASIC17.11■□□□□ 0.33
CASD1Q96PB1 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.11■□□□□ 0.33
CASD1Q96PB1 AC106886.4-201ENST00000623557 2502 ntBASIC17.11■□□□□ 0.33
CASD1Q96PB1 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.11■□□□□ 0.33
CASD1Q96PB1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CASD1Q96PB1 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 AC134407.2-201ENST00000625089 1978 ntBASIC17.1■□□□□ 0.33
CASD1Q96PB1 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CASD1Q96PB1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.1■□□□□ 0.33
CASD1Q96PB1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms