Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC239600.1-201ENST00000603201 462 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 ZACNP1-201ENST00000612259 710 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC090857.1-201ENST00000527400 390 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 VENTXP4-201ENST00000449029 958 ntBASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SYNE2Q8WXH0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 AC093010.1-201ENST00000473625 1624 ntBASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 AC090502.4-201ENST00000551714 1386 ntBASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 HMGA1P2-201ENST00000430198 324 ntBASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 RPL13P2-201ENST00000440687 659 ntBASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 MYL6-215ENST00000549566 685 ntTSL 2 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 AC005993.1-201ENST00000555581 397 ntTSL 5 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 TPST2P1-201ENST00000564073 1102 ntBASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 MPDU1-223ENST00000582151 728 ntBASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC6.35□□□□□ -1.39
SYNE2Q8WXH0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms