Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.01■□□□□ 0.79
SYNE4Q8N205 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNE4Q8N205 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.01■□□□□ 0.79
SYNE4Q8N205 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SYNE4Q8N205 MIR4525-201ENST00000580000 75 ntBASIC20.01■□□□□ 0.79
SYNE4Q8N205 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.01■□□□□ 0.79
SYNE4Q8N205 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SYNE4Q8N205 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.01■□□□□ 0.79
SYNE4Q8N205 AC084346.2-201ENST00000607097 949 ntBASIC20.01■□□□□ 0.79
SYNE4Q8N205 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC20.01■□□□□ 0.79
SYNE4Q8N205 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20■□□□□ 0.79
SYNE4Q8N205 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 RN7SL399P-201ENST00000471648 279 ntBASIC20■□□□□ 0.79
SYNE4Q8N205 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC20■□□□□ 0.79
SYNE4Q8N205 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20■□□□□ 0.79
SYNE4Q8N205 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20■□□□□ 0.79
SYNE4Q8N205 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 ME2P1-201ENST00000426028 1970 ntBASIC20■□□□□ 0.79
SYNE4Q8N205 AC134407.2-201ENST00000625089 1978 ntBASIC20■□□□□ 0.79
SYNE4Q8N205 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20■□□□□ 0.79
SYNE4Q8N205 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SYNE4Q8N205 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 MIR4538-201ENST00000581377 78 ntBASIC19.99■□□□□ 0.79
SYNE4Q8N205 AC008735.3-201ENST00000596646 500 ntBASIC19.99■□□□□ 0.79
SYNE4Q8N205 AL158212.4-201ENST00000624062 1286 ntBASIC19.99■□□□□ 0.79
SYNE4Q8N205 AL033527.5-201ENST00000641382 801 ntBASIC19.99■□□□□ 0.79
SYNE4Q8N205 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SYNE4Q8N205 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.99■□□□□ 0.79
SYNE4Q8N205 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNE4Q8N205 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNE4Q8N205 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNE4Q8N205 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNE4Q8N205 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SYNE4Q8N205 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNE4Q8N205 BNIP3P42-201ENST00000454982 569 ntBASIC19.98■□□□□ 0.79
SYNE4Q8N205 FAM8A2P-201ENST00000528813 1142 ntBASIC19.98■□□□□ 0.79
SYNE4Q8N205 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 BNIP3P29-201ENST00000598302 571 ntBASIC19.98■□□□□ 0.79
SYNE4Q8N205 AC011447.5-201ENST00000616168 564 ntBASIC19.98■□□□□ 0.79
SYNE4Q8N205 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNE4Q8N205 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SYNE4Q8N205 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.98■□□□□ 0.79
SYNE4Q8N205 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms