Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 AC005622.1-201ENST00000636801 1703 ntBASIC16.39■□□□□ 0.21
RAPH1Q70E73 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAPH1Q70E73 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.39■□□□□ 0.21
RAPH1Q70E73 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 AC108073.2-201ENST00000464002 357 ntBASIC16.38■□□□□ 0.21
RAPH1Q70E73 UNC93B7-201ENST00000509439 705 ntBASIC16.38■□□□□ 0.21
RAPH1Q70E73 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 TP73-AS1-207ENST00000624167 988 ntBASIC16.38■□□□□ 0.21
RAPH1Q70E73 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RAPH1Q70E73 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAPH1Q70E73 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 AP003680.1-201ENST00000598970 3660 ntBASIC16.37■□□□□ 0.21
RAPH1Q70E73 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 HNRNPDP1-201ENST00000439535 754 ntBASIC16.37■□□□□ 0.21
RAPH1Q70E73 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.37■□□□□ 0.21
RAPH1Q70E73 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 LINC02447-202ENST00000501888 2146 ntBASIC16.37■□□□□ 0.21
RAPH1Q70E73 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.37■□□□□ 0.21
RAPH1Q70E73 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAPH1Q70E73 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms