Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NHLRC1Q6VVB1 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 AC073389.1-201ENST00000595595 795 ntBASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 AKAP8P1-201ENST00000434743 1349 ntBASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 PMS2P7-201ENST00000506558 1336 ntBASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NHLRC1Q6VVB1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 FOXO1B-201ENST00000504678 1527 ntBASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 LINC01225-203ENST00000563550 1244 ntBASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 AC002347.1-201ENST00000569543 541 ntBASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 C20orf181-201ENST00000623918 480 ntBASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.61□□□□□ -0.07
NHLRC1Q6VVB1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 AL355306.1-201ENST00000415580 579 ntBASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 AL671277.1-201ENST00000429656 993 ntBASIC14.6□□□□□ -0.07
NHLRC1Q6VVB1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms