Protein–RNA interactions for Protein: Q5VV41

ARHGEF16, Rho guanine nucleotide exchange factor 16, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16Q5VV41 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ARHGEF16Q5VV41 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
ARHGEF16Q5VV41 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 RN7SL692P-201ENST00000464677 288 ntBASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 API5-211ENST00000534695 560 ntTSL 5 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 SRD5A3P1-201ENST00000603021 949 ntBASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 AC004790.1-201ENST00000612686 536 ntBASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ARHGEF16Q5VV41 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 DFFBP1-201ENST00000433250 979 ntBASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 HIST3H2BA-201ENST00000436555 524 ntBASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 AL596325.1-201ENST00000563991 1082 ntBASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 TP53TG3HP-202ENST00000569755 579 ntBASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ARHGEF16Q5VV41 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ARHGEF16Q5VV41 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF16Q5VV41 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF16Q5VV41 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF16Q5VV41 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF16Q5VV41 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ARHGEF16Q5VV41 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ARHGEF16Q5VV41 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms