Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CDC42BPAQ5VT25 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 PFN1P12-201ENST00000455938 534 ntBASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 GAPDHP40-201ENST00000505218 1006 ntBASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 EHF-205ENST00000527935 557 ntTSL 2 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 MIR326-201ENST00000362220 95 ntBASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 TPI1-206ENST00000488464 791 ntTSL 5 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 AC078819.1-201ENST00000547454 765 ntBASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 AC012085.1-201ENST00000548270 765 ntBASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 HNRNPA1P48-202ENST00000565308 961 ntBASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPAQ5VT25 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 AC092171.3-201ENST00000610122 2651 ntBASIC24■■□□□ 1.43
CDC42BPAQ5VT25 AL138709.1-201ENST00000614840 1693 ntBASIC24■■□□□ 1.43
CDC42BPAQ5VT25 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 AC006449.6-201ENST00000612330 2296 ntBASIC24■■□□□ 1.43
CDC42BPAQ5VT25 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPAQ5VT25 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 MTX1P1-201ENST00000440904 838 ntBASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 AP001582.1-201ENST00000525856 295 ntBASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 AC138951.2-201ENST00000623455 1161 ntBASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPAQ5VT25 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 CNN2P10-201ENST00000443067 918 ntBASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 MIR3615-201ENST00000581999 87 ntBASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPAQ5VT25 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms