Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 MTDHP4-201ENST00000600287 670 ntBASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 AC138894.3-201ENST00000603787 634 ntBASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 NPAP1P7-201ENST00000613027 823 ntBASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 BCL10-202ENST00000620248 774 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 AC138035.3-201ENST00000622706 2791 ntBASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
LINC00242Q5T6M2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AC006504.4-201ENST00000592118 1568 ntBASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 MTDHP3-201ENST00000594186 672 ntBASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 AL161772.1-201ENST00000610494 4412 ntBASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
LINC00242Q5T6M2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms