Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.8■□□□□ 0.76
SCN7AQ01118 AC093813.1-201ENST00000605066 256 ntBASIC19.8■□□□□ 0.76
SCN7AQ01118 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SCN7AQ01118 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN7AQ01118 AC138951.2-201ENST00000623455 1161 ntBASIC19.8■□□□□ 0.76
SCN7AQ01118 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.8■□□□□ 0.76
SCN7AQ01118 AC008687.7-202ENST00000637404 953 ntBASIC19.8■□□□□ 0.76
SCN7AQ01118 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SCN7AQ01118 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN7AQ01118 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN7AQ01118 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
SCN7AQ01118 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN7AQ01118 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SCN7AQ01118 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 ACTBP8-201ENST00000403258 1108 ntBASIC19.79■□□□□ 0.76
SCN7AQ01118 GPAA1P2-201ENST00000417923 928 ntBASIC19.79■□□□□ 0.76
SCN7AQ01118 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN7AQ01118 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SCN7AQ01118 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN7AQ01118 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.79■□□□□ 0.76
SCN7AQ01118 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN7AQ01118 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.79■□□□□ 0.76
SCN7AQ01118 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SCN7AQ01118 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SCN7AQ01118 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN7AQ01118 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN7AQ01118 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.79■□□□□ 0.76
SCN7AQ01118 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.78■□□□□ 0.76
SCN7AQ01118 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN7AQ01118 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SCN7AQ01118 MTX1P1-201ENST00000440904 838 ntBASIC19.78■□□□□ 0.76
SCN7AQ01118 GOLGA2P4-201ENST00000441462 777 ntBASIC19.78■□□□□ 0.76
SCN7AQ01118 AC084346.2-201ENST00000607097 949 ntBASIC19.78■□□□□ 0.76
SCN7AQ01118 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.78■□□□□ 0.76
SCN7AQ01118 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.78■□□□□ 0.76
SCN7AQ01118 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.78■□□□□ 0.76
SCN7AQ01118 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN7AQ01118 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SCN7AQ01118 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SCN7AQ01118 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.78■□□□□ 0.76
SCN7AQ01118 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.78■□□□□ 0.76
SCN7AQ01118 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.78■□□□□ 0.76
SCN7AQ01118 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SCN7AQ01118 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SCN7AQ01118 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN7AQ01118 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SCN7AQ01118 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN7AQ01118 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.77■□□□□ 0.76
SCN7AQ01118 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.77■□□□□ 0.76
SCN7AQ01118 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
SCN7AQ01118 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SCN7AQ01118 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC19.77■□□□□ 0.76
SCN7AQ01118 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.77■□□□□ 0.76
SCN7AQ01118 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SCN7AQ01118 AP001582.1-201ENST00000525856 295 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms