Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.12■□□□□ 0.49
ASIC1P78348 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.12■□□□□ 0.49
ASIC1P78348 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ASIC1P78348 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.12■□□□□ 0.49
ASIC1P78348 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.12■□□□□ 0.49
ASIC1P78348 ADH5P3-201ENST00000433842 1137 ntBASIC18.12■□□□□ 0.49
ASIC1P78348 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
ASIC1P78348 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
ASIC1P78348 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.12■□□□□ 0.49
ASIC1P78348 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.12■□□□□ 0.49
ASIC1P78348 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ASIC1P78348 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.12■□□□□ 0.49
ASIC1P78348 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
ASIC1P78348 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
ASIC1P78348 AC073389.1-201ENST00000595595 795 ntBASIC18.12■□□□□ 0.49
ASIC1P78348 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
ASIC1P78348 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ASIC1P78348 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.12■□□□□ 0.49
ASIC1P78348 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.12■□□□□ 0.49
ASIC1P78348 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.12■□□□□ 0.49
ASIC1P78348 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.12■□□□□ 0.49
ASIC1P78348 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ASIC1P78348 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ASIC1P78348 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.11■□□□□ 0.49
ASIC1P78348 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ASIC1P78348 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
ASIC1P78348 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ASIC1P78348 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ASIC1P78348 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.11■□□□□ 0.49
ASIC1P78348 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.11■□□□□ 0.49
ASIC1P78348 HAUS4P1-201ENST00000406739 1145 ntBASIC18.11■□□□□ 0.49
ASIC1P78348 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.11■□□□□ 0.49
ASIC1P78348 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.11■□□□□ 0.49
ASIC1P78348 AC105233.2-201ENST00000523697 349 ntBASIC18.11■□□□□ 0.49
ASIC1P78348 FAM86C2P-203ENST00000528684 1004 ntBASIC18.11■□□□□ 0.49
ASIC1P78348 AF228730.5-201ENST00000530288 346 ntBASIC18.11■□□□□ 0.49
ASIC1P78348 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.11■□□□□ 0.49
ASIC1P78348 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.11■□□□□ 0.49
ASIC1P78348 AC027307.2-201ENST00000591252 911 ntBASIC18.11■□□□□ 0.49
ASIC1P78348 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.11■□□□□ 0.49
ASIC1P78348 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ASIC1P78348 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC18.11■□□□□ 0.49
ASIC1P78348 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.11■□□□□ 0.49
ASIC1P78348 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.11■□□□□ 0.49
ASIC1P78348 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ASIC1P78348 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.11■□□□□ 0.49
ASIC1P78348 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.11■□□□□ 0.49
ASIC1P78348 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.11■□□□□ 0.49
ASIC1P78348 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ASIC1P78348 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ASIC1P78348 AC046158.3-201ENST00000624947 2558 ntBASIC18.11■□□□□ 0.49
ASIC1P78348 PRAL-201ENST00000624952 3286 ntBASIC18.11■□□□□ 0.49
ASIC1P78348 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 AP003680.1-201ENST00000598970 3660 ntBASIC18.1■□□□□ 0.49
ASIC1P78348 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ASIC1P78348 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ASIC1P78348 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.1■□□□□ 0.49
ASIC1P78348 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.1■□□□□ 0.49
ASIC1P78348 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.1■□□□□ 0.49
ASIC1P78348 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms