Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 KRT18P32-201ENST00000424695 1287 ntBASIC17.14■□□□□ 0.33
SNX16P57768 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.14■□□□□ 0.33
SNX16P57768 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX16P57768 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.14■□□□□ 0.33
SNX16P57768 AC069335.1-201ENST00000489972 472 ntBASIC17.14■□□□□ 0.33
SNX16P57768 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.14■□□□□ 0.33
SNX16P57768 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.14■□□□□ 0.33
SNX16P57768 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.14■□□□□ 0.33
SNX16P57768 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SNX16P57768 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SNX16P57768 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
SNX16P57768 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SNX16P57768 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
SNX16P57768 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SNX16P57768 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SNX16P57768 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 AC004461.1-201ENST00000412461 403 ntBASIC17.13■□□□□ 0.33
SNX16P57768 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 AP006288.1-201ENST00000446065 395 ntBASIC17.13■□□□□ 0.33
SNX16P57768 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 SNHG9-202ENST00000564014 471 ntBASIC17.13■□□□□ 0.33
SNX16P57768 AC026979.3-201ENST00000607315 403 ntBASIC17.13■□□□□ 0.33
SNX16P57768 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX16P57768 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.13■□□□□ 0.33
SNX16P57768 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX16P57768 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.13■□□□□ 0.33
SNX16P57768 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SNX16P57768 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.13■□□□□ 0.33
SNX16P57768 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SNX16P57768 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX16P57768 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX16P57768 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SNX16P57768 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX16P57768 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX16P57768 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX16P57768 MIR1233-2-201ENST00000408138 82 ntBASIC17.12■□□□□ 0.33
SNX16P57768 MIR1233-1-201ENST00000408722 82 ntBASIC17.12■□□□□ 0.33
SNX16P57768 AL627223.1-201ENST00000416693 442 ntBASIC17.12■□□□□ 0.33
SNX16P57768 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX16P57768 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX16P57768 SLC25A39P2-201ENST00000537614 270 ntBASIC17.12■□□□□ 0.33
SNX16P57768 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX16P57768 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.12■□□□□ 0.33
SNX16P57768 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.12■□□□□ 0.33
SNX16P57768 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SNX16P57768 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SNX16P57768 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX16P57768 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX16P57768 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.12■□□□□ 0.33
SNX16P57768 AC026691.1-201ENST00000602502 2017 ntBASIC17.12■□□□□ 0.33
SNX16P57768 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SNX16P57768 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX16P57768 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNX16P57768 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.12■□□□□ 0.33
SNX16P57768 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms